RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 FTHL17Q9BXU8 183 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 PIDD1Q9HB75 910 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 XPO7Q9UIA9 1087 aaKnown RBP13.05□□□□□ -0.32
GGPS1-202ENST00000358966 STAP1Q9ULZ2 295 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 PCDHB8Q9UN66 801 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 CEP290O15078 2479 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 INPPL1O15357 1258 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 TTC4O95801 387 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 NUDT17P0C025 328 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 GBP1P32455 592 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 LSP1P33241 339 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 SEC24CP53992 1094 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 PDIA2Q13087 525 aaKnown RBP13.05□□□□□ -0.32
GGPS1-202ENST00000358966 CTXN3Q4LDR2 81 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 ZCCHC9Q8N567 271 aaKnown RBP13.05□□□□□ -0.32
GGPS1-202ENST00000358966 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.05□□□□□ -0.32
GGPS1-202ENST00000358966 SEPT8Q92599 483 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 VWCEQ96DN2 955 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 SIK2Q9H0K1 926 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 RAB6BQ9NRW1 208 aa13.05□□□□□ -0.32
GGPS1-202ENST00000358966 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
GGPS1-202ENST00000358966 ADAM12O43184 909 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 CSPG5O95196 566 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 VAV1P15498 845 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 SCNN1AP37088 669 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 MAGEA4P43358 317 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 PRMT2P55345 433 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 MYBPC3Q14896 1274 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 EFTUD2Q15029 972 aaKnown RBP eCLIP13.04□□□□□ -0.327e-7■□□□□ 9.7
GGPS1-202ENST00000358966 SMAD1Q15797 465 aaKnown RBP13.04□□□□□ -0.32
GGPS1-202ENST00000358966 BNIPLQ7Z465 357 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 DQX1Q8TE96 717 aaKnown RBP13.04□□□□□ -0.32
GGPS1-202ENST00000358966 ZFAND2BQ8WV99 257 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 FAF2Q96CS3 445 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 CCT8L2Q96SF2 557 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 FAM167BQ9BTA0 163 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 TKTL2Q9H0I9 626 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 ZFATQ9P243 1243 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 DSEQ9UL01 958 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 A6NNZ2 444 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 MOCS2O96007 188 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-202ENST00000358966 ZNF24P17028 368 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 NAT1P18440 290 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 ARL4AP40617 200 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 TUBB8Q3ZCM7 444 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 ARCQ7LC44 396 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 SDCCAG8Q86SQ7 713 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-202ENST00000358966 NPWQ8N729 165 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 COLEC11Q9BWP8 271 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 SEPT10Q9P0V9 454 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 A0A1W2PQH9 124 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 LIN7AO14910 233 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-202ENST00000358966 TBX18O95935 607 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 SRGAP2BP0DMP2 458 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 CPB1P15086 417 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 SSTR1P30872 391 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 ADRA1BP35368 520 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 GRIA1P42261 906 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 SFSWAPQ12872 951 aaKnown RBP13.04□□□□□ -0.32
GGPS1-202ENST00000358966 XRCC4Q13426 336 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 NUGGCQ68CJ6 796 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 SCD5Q86SK9 330 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 IGDCC3Q8IVU1 814 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 CYP4X1Q8N118 509 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 AGGF1Q8N302 714 aaeCLIP13.04□□□□□ -0.32
GGPS1-202ENST00000358966 NAT8LQ8N9F0 302 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 CASP10Q92851 521 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 RNF34Q969K3 372 aa13.04□□□□□ -0.32
GGPS1-202ENST00000358966 UBE2OQ9C0C9 1292 aaKnown RBP13.04□□□□□ -0.32
GGPS1-202ENST00000358966 FNDC1Q4ZHG4 1894 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-202ENST00000358966 MICAL3Q7RTP6 2002 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 KCNK1O00180 336 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 EEF2KO00418 725 aaKnown RBP13.03□□□□□ -0.32
GGPS1-202ENST00000358966 TNFRSF10BO14763 440 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 RASGRF2O14827 1237 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 ZNF189O75820 626 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-202ENST00000358966 FBXO21O94952 628 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 METTL18O95568 372 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 APRTP07741 180 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 TYMPP19971 482 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 ELF3P78545 371 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-202ENST00000358966 OLIG2Q13516 323 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 HIF1AQ16665 826 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 BBS9Q3SYG4 887 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 EFHC2Q5JST6 749 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 FUT10Q6P4F1 479 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 CRIPAKQ8N1N5 446 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 SEPT5Q99719 369 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-202ENST00000358966 PRDM5Q9NQX1 630 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-202ENST00000358966 MAP3K13O43283 966 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 OAZ2O95190 189 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 ALDH2P05091 517 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 GALTP07902 379 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 TGM2P21980 687 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 YWHAGP61981 247 aaKnown RBP eCLIP13.03□□□□□ -0.32
GGPS1-202ENST00000358966 AP1B1Q10567 949 aa13.03□□□□□ -0.32
GGPS1-202ENST00000358966 SF3A3Q12874 501 aaKnown RBP eCLIP13.03□□□□□ -0.32
GGPS1-202ENST00000358966 AUHQ13825 339 aaKnown RBP13.03□□□□□ -0.32
GGPS1-202ENST00000358966 MORF4L2Q15014 288 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms