RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FAM167AQ96KS9 214 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 LENG8Q96PV6 779 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 OMDQ99983 421 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 SDCBP2Q9H190 292 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 SYBUQ9NX95 663 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 FNDC3AQ9Y2H6 1198 aaKnown RBP6.75□□□□□ -1.33
CSDE1-203ENST00000358528 AFG3L2Q9Y4W6 797 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 HES2Q9Y543 173 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 PSAT1Q9Y617 370 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 V9GYQ6 96 aa6.75□□□□□ -1.33
CSDE1-203ENST00000358528 SPATA31C2B4DYI2 1134 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 CCDC130P13994 396 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 MPSTP25325 297 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 CRHR1P34998 444 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 ARL2P36404 184 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 IDH3AP50213 366 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 PLK1P53350 603 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 HDAC4P56524 1084 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 FKBP1AP62942 108 aaKnown RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 KCNJ11Q14654 390 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 KCTD2Q14681 263 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 TMEM259Q4ZIN3 620 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 HABP4Q5JVS0 413 aaKnown RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 PPM1LQ5SGD2 360 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 PMF1Q6P1K2 205 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 CATSPER4Q7RTX7 472 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 FAM83AQ86UY5 434 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 CAND1Q86VP6 1230 aaKnown RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 CMASQ8NFW8 434 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 FAM136AQ96C01 138 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 DCUN1D5Q9BTE7 237 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 ADAMTS6Q9UKP5 1117 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 SYNPO2Q9UMS6 1093 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 RUVBL2Q9Y230 463 aaKnown RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 LZTS1Q9Y250 596 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 PCDHA11Q9Y5I1 949 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 ADAMTSL1Q8N6G6 1762 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 RNF103-CHMP3A0A140T963 221 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 KLRG2A4D1S0 409 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 STX16-NPEPL1H3BU86 382 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 AKAP10O43572 662 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 PLA2G6O60733 806 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 PIGNO95427 931 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 FAM200BP0CF97 657 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 DPEP1P16444 411 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 GRK2P25098 689 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 CCR10P46092 362 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 MAPK10P53779 464 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 TPD52P55327 224 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 USP46P62068 366 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 CYLC2Q14093 348 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 PDK1Q15118 436 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 KIF19Q2TAC6 998 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 TMEM198Q66K66 360 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 SEL1L3Q68CR1 1132 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 POTEAQ6S8J7 498 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 KYAT3Q6YP21 454 aaKnown RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 FAM43BQ6ZT52 329 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 KYQ8NBH2 561 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 RNF169Q8NCN4 708 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 NAT14Q8WUY8 206 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 HDAC11Q96DB2 347 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 OXCT2Q9BYC2 517 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 FRMD8Q9BZ67 464 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 UBE2OQ9C0C9 1292 aaKnown RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 FAM96AQ9H5X1 160 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 TLE6Q9H808 572 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 MAP3K20Q9NYL2 800 aaKnown RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 ABCA3Q99758 1704 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 NHSQ6T4R5 1651 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 ANKRD12Q6UB98 2062 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 M0QYT0 321 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 GPR25O00155 361 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 HCRTO43612 131 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 PLIN3O60664 434 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 CRCPO75575 148 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 SLC4A1P02730 911 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 THRAP10827 490 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 ZFXP17010 805 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 EEF1B2P24534 225 aaKnown RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 GNL1P36915 607 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 GABRB2P47870 512 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 RAP1GDS1P52306 607 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 KLF10Q13118 480 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 PDAP1Q13442 181 aaKnown RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 STILQ15468 1287 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 AMIGO2Q86SJ2 522 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 LCA5Q86VQ0 697 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 EGFL6Q8IUX8 553 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 ADGRF2Q8IZF7 708 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 JADE3Q92613 823 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 DCUN1D1Q96GG9 259 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 TMPRSS4Q9NRS4 437 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 SNX15Q9NRS6 342 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 BARX2Q9UMQ3 279 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-203ENST00000358528 PCDHGC3Q9UN70 934 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 EFR3BQ9Y2G0 817 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 AP4B1Q9Y6B7 739 aa6.74□□□□□ -1.33
CSDE1-203ENST00000358528 CNTNAP1P78357 1384 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 A0A088AWK7 358 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms