RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 DAGLAQ9Y4D2 1042 aa9.98□□□□□ -0.81
CHD3-202ENST00000358181 WDR19Q8NEZ3 1342 aa9.98□□□□□ -0.81
CHD3-202ENST00000358181 AVILO75366 819 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ALOX12P18054 663 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 TGM2P21980 687 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 PDK1Q15118 436 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 C2CD6Q53TS8 623 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 PITRM1Q5JRX3 1037 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 RAET1GQ6H3X3 334 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 VSTM4Q8IW00 320 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 TRMT2AQ8IZ69 625 aaKnown RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 MAGEE2Q8TD90 523 aaPredicted RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 CCDC115Q96NT0 180 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ABCG8Q9H221 673 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 OSBPL3Q9H4L5 887 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 CEP72Q9P209 647 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 BCLAF3A2AJT9 711 aaKnown RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 DPEP1P16444 411 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 SPRP35270 261 aaPredicted RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 EMC2Q15006 297 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 UGP2Q16851 508 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ZNF697Q5TEC3 545 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 UBE2R2Q712K3 238 aaPredicted RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 TREML1Q86YW5 311 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 HPDLQ96IR7 371 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 FRMD8Q9BZ67 464 aaPredicted RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 RIBC2Q9H4K1 309 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 SIRPGQ9P1W8 387 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 XPR1Q9UBH6 696 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 CEP152O94986 1710 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ABCA8O94911 1581 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 NOS1APO75052 506 aaPredicted RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 S100A9P06702 114 aaKnown RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 RASA1P20936 1047 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 EFNA5P52803 228 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 TERF2Q15554 542 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 TRIP10Q15642 601 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ENKURQ8TC29 256 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 FAM120BQ96EK7 910 aaKnown RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 ADGRE3Q9BY15 652 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 PDGFDQ9GZP0 370 aaPredicted RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 DKK3Q9UBP4 350 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 PITPNM2Q9BZ72 1349 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 H0Y858 1186 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 MATN4O95460 622 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 MSL3P1P0C860 447 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 TSNQ15631 228 aaKnown RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 RAB11FIP2Q7L804 512 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 FAM81AQ8TBF8 368 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 C5orf34Q96MH7 638 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 USP27XA6NNY8 438 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 WRBO00258 174 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 FCHO1O14526 889 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ABATP80404 500 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 OTUD4Q01804 1114 aaKnown RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 LRRC63Q05C16 580 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ZNF846Q147U1 533 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 PRUNE1Q86TP1 453 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ATCAYQ86WG3 371 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 HDDC3Q8N4P3 179 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 TTC39CQ8N584 583 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ELMO3Q96BJ8 720 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 MS4A14Q96JA4 679 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 CORO1BQ9BR76 489 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 CCDC134Q9H6E4 229 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 VPS45Q9NRW7 570 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 PARPBPQ9NWS1 579 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 QRICH2Q9H0J4 1663 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 A0A088AWK7 358 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 KANSL1LA0AUZ9 987 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ANKDD1BA6NHY2 528 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ULK1O75385 1050 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ZNF10P21506 573 aaPredicted RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 WARSP23381 471 aaKnown RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 TAF6P49848 677 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 SKP1P63208 163 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 EPC2Q52LR7 807 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 UNC13DQ70J99 1090 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ZC3H7AQ8IWR0 971 aaKnown RBP9.97□□□□□ -0.81
CHD3-202ENST00000358181 GRIP2Q9C0E4 1043 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 PDGFCQ9NRA1 345 aa9.97□□□□□ -0.81
CHD3-202ENST00000358181 ARHGEF5Q12774 1597 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 ISM1B1AKI9 464 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 EIF3DO15371 548 aaKnown RBP eCLIP9.96□□□□□ -0.81
CHD3-202ENST00000358181 CFIP05156 583 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 CCNA2P20248 432 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 GTF2H1P32780 548 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 CRATP43155 626 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 GMPSP49915 693 aaPredicted RBP9.96□□□□□ -0.81
CHD3-202ENST00000358181 GRM4Q14833 912 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 CERCAMQ5T4B2 595 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 AGAP9Q5VTM2 703 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 PYHIN1Q6K0P9 492 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 CDC42EP5Q6NZY7 148 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 NAT16Q8N8M0 369 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 TBATAQ96M53 351 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 MBD5Q9P267 1494 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 ZNF879B4DU55 563 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 KCNA3P22001 575 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 LIFRP42702 1097 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms