RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 DGKIO75912 1065 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 GNRH1P01148 92 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 PSMA4P25789 261 aaKnown RBP10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 HIRAP54198 1017 aaPredicted RBP10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 ATXN3P54252 364 aaPredicted RBP10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 SKP1P63208 163 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 ZBTB17Q13105 803 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 MAD2L1Q13257 205 aaPredicted RBP10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 RRP1BQ14684 758 aaKnown RBP10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 SH3RF1Q7Z6J0 888 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 MED8Q96G25 268 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 PHTF1Q9UMS5 762 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 MRPS23Q9Y3D9 190 aaKnown RBP10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 NFAT5O94916 1531 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 ERI2A8K979 691 aaKnown RBP10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 TMEM114B3SHH9 223 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 DNALI1O14645 258 aaPredicted RBP10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 KRT6AP02538 564 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 KRT6BP04259 564 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 CPA3P15088 417 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 KRT6CP48668 564 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 CYP51A1Q16850 503 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 DAB2IPQ5VWQ8 1189 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 ANKRD52Q8NB46 1076 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 CYGBQ8WWM9 190 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 FUCA2Q9BTY2 467 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 ACTR8Q9H981 624 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 ZNF510Q9Y2H8 683 aa10.57□□□□□ -0.72
SPTAN1-201ENST00000358161 GP5P40197 560 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 NUDT2P50583 147 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 CYLC2Q14093 348 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 C16orf59Q7L2K0 433 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 MCOLN3Q8TDD5 553 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 PURBQ96QR8 312 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 EFCAB1Q9HAE3 211 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 CYP4F12Q9HCS2 524 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 POLG2Q9UHN1 485 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 PTCH2Q9Y6C5 1203 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 CCT8L1PA6NM43 557 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 KPNA3O00505 521 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 DDX3XO00571 662 aaKnown RBP eCLIP10.56□□□□□ -0.726e-33■■■■□ 20.9
SPTAN1-201ENST00000358161 IFNA14P01570 189 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 NUMBP49757 651 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 ITGA7Q13683 1181 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 MIEF1Q9NQG6 463 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 RGS18Q9NS28 235 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 OR12D3Q9UGF7 316 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 FBXO10Q9UK96 956 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 H3BMM5 538 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 TCN1P20061 433 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 KCNT2Q6UVM3 1135 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 TOP6BLQ8N6T0 577 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 OMDQ99983 421 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 CORO1BQ9BR76 489 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 SYT17Q9BSW7 474 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 OXCT2Q9BYC2 517 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 MPP6Q9NZW5 540 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 ASTN1O14525 1302 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 ZNF541Q9H0D2 1346 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 LYPLA2O95372 231 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 HDCP19113 662 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 ZNF143P52747 638 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 PPP3CAQ08209 521 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 LAYNQ6UX15 382 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 DEFB118Q96PH6 123 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 TSC22D3Q99576 134 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 FAM105AQ9NUU6 356 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 DNPEPQ9ULA0 475 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 KANSL1LA0AUZ9 987 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 OR6C75A6NL08 312 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 BTBD19C9JJ37 291 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 ANKRD65E5RJM6 399 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 USP2O75604 605 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 ERBB2P04626 1255 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 HPGDP15428 266 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 PGS1Q32NB8 556 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 TPGS1Q6ZTW0 290 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 LRRC49Q8IUZ0 686 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 TDRD5Q8NAT2 981 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 FAM136AQ96C01 138 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 ZCWPW1Q9H0M4 648 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 HIPK3Q9H422 1215 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 L2HGDHQ9H9P8 463 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 WDR27A2RRH5 827 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 SEC24DO94855 1032 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 GUCA1CO95843 209 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 PYGMP11217 842 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 FGFR1P11362 822 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 SLC45A4Q5BKX6 768 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 IL31RAQ8NI17 732 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 FBXO25Q8TCJ0 367 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 DIS3LQ8TF46 1054 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 MYLPFQ96A32 169 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 AHCYL2Q96HN2 611 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 CNDP1Q96KN2 507 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 PPP1R10Q96QC0 940 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 CAPN10Q9HC96 672 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 SCN3BQ9NY72 215 aa10.56□□□□□ -0.72
SPTAN1-201ENST00000358161 FAM237AA0A1B0GTK4 181 aa10.55□□□□□ -0.72
SPTAN1-201ENST00000358161 PDZK1P1A8MUH7 402 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms