RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 KRT35Q92764 455 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 NECAB3Q96P71 396 aaPredicted RBP15.37■□□□□ 0.05
CCNE1-202ENST00000357943 ALS2CR12Q96Q35 445 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 CD320Q9NPF0 282 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 SPHK2Q9NRA0 654 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 GOLGA6L9A6NEM1 432 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 E9PAM4 449 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 F5H5T6 163 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 KRT7P08729 469 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 TDGQ13569 410 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 DHCR24Q15392 516 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 DPYSL2Q16555 572 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 PPP6R3Q5H9R7 873 aaPredicted RBP15.36■□□□□ 0.05
CCNE1-202ENST00000357943 LY6G5CQ5SRR4 150 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 LRRC38Q5VT99 294 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 PSTKQ8IV42 348 aaKnown RBP15.36■□□□□ 0.05
CCNE1-202ENST00000357943 ZNF683Q8IZ20 524 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 LGI2Q8N0V4 545 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 CFAP52Q8N1V2 620 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 TTC8Q8TAM2 541 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 IRF7Q92985 503 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 ATP2A3Q93084 1043 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 IGSF8Q969P0 613 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 KCTD15Q96SI1 283 aaPredicted RBP15.36■□□□□ 0.05
CCNE1-202ENST00000357943 PLK2Q9NYY3 685 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 AMFRQ9UKV5 643 aa15.36■□□□□ 0.05
CCNE1-202ENST00000357943 PSTPIP1O43586 416 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 CREB3O43889 395 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 LRIG2O94898 1065 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 NFATC1O95644 943 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 CYP17A1P05093 508 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 CD48P09326 243 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 L1CAMP32004 1257 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 CTNNA1P35221 906 aaKnown RBP15.35■□□□□ 0.05
CCNE1-202ENST00000357943 IRAK1P51617 712 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 RPS24P62847 133 aaKnown RBP15.35■□□□□ 0.05
CCNE1-202ENST00000357943 SEMA3BQ13214 749 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 RUNX3Q13761 415 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 TJAP1Q5JTD0 557 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 ZFYVE27Q5T4F4 411 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 MANEALQ5VSG8 457 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 FYB2Q5VWT5 728 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 CIR1Q86X95 450 aaPredicted RBP15.35■□□□□ 0.05
CCNE1-202ENST00000357943 RNF135Q8IUD6 432 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 GJD3Q8N144 294 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 RAPGEF5Q92565 580 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 TMA16Q96EY4 203 aaKnown RBP15.35■□□□□ 0.05
CCNE1-202ENST00000357943 RPRD1AQ96P16 312 aaPredicted RBP15.35■□□□□ 0.05
CCNE1-202ENST00000357943 DDX50Q9BQ39 737 aaKnown RBP15.35■□□□□ 0.05
CCNE1-202ENST00000357943 ECT2Q9H8V3 914 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 NEU3Q9UQ49 428 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 KIF26AQ9ULI4 1882 aaPredicted RBP15.35■□□□□ 0.05
CCNE1-202ENST00000357943 NEDD8-MDP1E9PL57 170 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 ZNF500O60304 480 aaPredicted RBP15.35■□□□□ 0.05
CCNE1-202ENST00000357943 ARSEP51690 589 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 CDH6P55285 790 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 NRG1Q02297 640 aaPredicted RBP15.35■□□□□ 0.05
CCNE1-202ENST00000357943 ANO4Q32M45 955 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 ZNF569Q5MCW4 686 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 ACBD5Q5T8D3 534 aaPredicted RBP15.35■□□□□ 0.05
CCNE1-202ENST00000357943 LRRC31Q6UY01 552 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 DDI1Q8WTU0 396 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 BBS2Q9BXC9 721 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 MPP6Q9NZW5 540 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 PCDHA3Q9Y5H8 950 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 MYO10Q9HD67 2058 aa15.35■□□□□ 0.05
CCNE1-202ENST00000357943 IGLV3-10A0A075B6K4 115 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 PI4K2BG5E9Z4 385 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 KIF5CO60282 957 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 CNTN5O94779 1100 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 GOT1P17174 413 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 CTNNA2P26232 953 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 PEX5P50542 639 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 DNA2P51530 1060 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 C5orf22Q49AR2 442 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 MPPE1Q53F39 396 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 ALFQ53S48 1182 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 IER5LQ5T953 404 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 MEI1Q5TIA1 1274 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 SLC35F6Q8N357 371 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 KCTD6Q8NC69 237 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 HES6Q96HZ4 224 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 EPAS1Q99814 870 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 PCDH18Q9HCL0 1135 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 RRAGDQ9NQL2 400 aaPredicted RBP15.34■□□□□ 0.05
CCNE1-202ENST00000357943 CWC15Q9P013 229 aaKnown RBP15.34■□□□□ 0.05
CCNE1-202ENST00000357943 MARK1Q9P0L2 795 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 STIM2Q9P246 746 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 DUSP12Q9UNI6 340 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 SORCS3Q9UPU3 1222 aa15.34■□□□□ 0.05
CCNE1-202ENST00000357943 CCDC66A2RUB6 948 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 DRGXA6NNA5 263 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 DDX3YO15523 660 aaKnown RBP15.33■□□□□ 0.04
CCNE1-202ENST00000357943 TBL1XO60907 577 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 ADH1CP00326 375 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 PENKP01210 267 aaPredicted RBP15.33■□□□□ 0.04
CCNE1-202ENST00000357943 KRT1P04264 644 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 CYBBP04839 570 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 ADH5P11766 374 aa15.33■□□□□ 0.04
CCNE1-202ENST00000357943 SRFP11831 508 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms