RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 ARL4CP56559 192 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 OVGP1Q12889 678 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 EFTUD2Q15029 972 aaKnown RBP eCLIP13.08□□□□□ -0.329e-7■■■■□ 20.8
RTFDC1-202ENST00000357348 HP1BP3Q5SSJ5 553 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 PPP1R15BQ5SWA1 713 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 SPOUT1Q5T280 376 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 RNF220Q5VTB9 566 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 DENND1BQ6P3S1 775 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 TMEM173Q86WV6 379 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 CPT1BQ92523 772 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 TMEM120AQ9BXJ8 343 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 DDX56Q9NY93 547 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 CPSF2Q9P2I0 782 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 PDP2Q9P2J9 529 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 M0QYV0 167 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 INPPL1O15357 1258 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 SSR1P43307 286 aaKnown RBP13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 SLC11A1P49279 550 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 MSS51Q4VC12 460 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 TFDP3Q5H9I0 405 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 FNBP1LQ5T0N5 605 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 KIAA0319Q5VV43 1072 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 KAZNQ674X7 775 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 DCLRE1AQ6PJP8 1040 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 LRRC6Q86X45 466 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 NIPA2Q8N8Q9 360 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 PPFIBP2Q8ND30 876 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 PYROXD1Q8WU10 500 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 RSPH1Q8WYR4 309 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 TOP1MTQ969P6 601 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 AZIN2Q96A70 460 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 PRR11Q96HE9 360 aaPredicted RBP13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 IL23AQ9NPF7 189 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 CXXC1Q9P0U4 656 aaPredicted RBP13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 TSPAN16Q9UKR8 245 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 A0A0G2JND7 137 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 ABHD14A-ACY1A0A1B0GW23 586 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 C3orf70A6NLC5 250 aaPredicted RBP13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 DGKIO75912 1065 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 MICAL2O94851 1124 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 AMHP03971 560 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 ALDH2P05091 517 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 SSTR1P30872 391 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 RABGGTBP53611 331 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 CACNA2D1P54289 1103 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 FPGSQ05932 587 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 CDK18Q07002 472 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 SEPT7Q16181 437 aaKnown RBP13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 CAPN12Q6ZSI9 719 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 ANKMY2Q8IV38 441 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 KBTBD2Q8IY47 623 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 VPS52Q8N1B4 723 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 ARHGAP24Q8N264 748 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 WDTC1Q8N5D0 677 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 TOP6BLQ8N6T0 577 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 MCUR1Q96AQ8 359 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 APOPT1Q96IL0 206 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 ZNF184Q99676 751 aaPredicted RBP13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 KLHL11Q9NVR0 708 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 TJP2Q9UDY2 1190 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 STRIP2Q9ULQ0 834 aa13.07□□□□□ -0.32
RTFDC1-202ENST00000357348 VWA8A3KMH1 1905 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 WDR91A4D1P6 747 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 CAPN14A8MX76 684 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 CLDN5O00501 218 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 BANF1O75531 89 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 AP1G2O75843 785 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 VDRP11473 427 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 ESRRAP11474 423 aaPredicted RBP13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 ODC1P11926 461 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 SESN3P58005 492 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 RPL7AP62424 266 aaKnown RBP13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 TAZQ16635 292 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 SLC5A9Q2M3M2 681 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 GOLGA7BQ2TAP0 167 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 ANKRD22Q5VYY1 191 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 C3orf62Q6ZUJ4 267 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 OXNAD1Q96HP4 312 aaPredicted RBP13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 UROC1Q96N76 676 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 TMEM209Q96SK2 561 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 TMEM121Q9BTD3 319 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 FBXO6Q9NRD1 293 aaPredicted RBP13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 CYTH4Q9UIA0 394 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 CHD7Q9P2D1 2997 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 TSC2P49815 1807 aa13.06□□□□□ -0.32
RTFDC1-202ENST00000357348 FCHO1O14526 889 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 MAP3K7O43318 606 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 HOXA2O43364 376 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 FGBP02675 491 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 TKTP29401 623 aaKnown RBP13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 RPS6KA3P51812 740 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 GAD2Q05329 585 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 MDH1BQ5I0G3 518 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 CYP4A22Q5TCH4 519 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 POLNQ7Z5Q5 900 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 NET1Q7Z628 596 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 TMPRSS6Q8IU80 811 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 SLC2A14Q8TDB8 520 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 NCSTNQ92542 709 aa13.05□□□□□ -0.32
RTFDC1-202ENST00000357348 MRRFQ96E11 262 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms