RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 WDR81Q562E7 1941 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 H3BSA7 217 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 ZNF195O14628 629 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 TRDMT1O14717 391 aaKnown RBP10.42□□□□□ -0.74
PTPRA-203ENST00000356147 BIRC5O15392 142 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 MED7O43513 233 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 LTFP02788 710 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 RPL10P27635 214 aaKnown RBP10.42□□□□□ -0.74
PTPRA-203ENST00000356147 TMED1Q13445 227 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 NXNQ6DKJ4 435 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 ARCQ7LC44 396 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 KBTBD6Q86V97 674 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 SNX31Q8N9S9 440 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 ACVR1CQ8NER5 493 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 CMTM5Q96DZ9 223 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 PRICKLE1Q96MT3 831 aaPredicted RBP10.42□□□□□ -0.74
PTPRA-203ENST00000356147 MINDY3Q9H8M7 445 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.41□□□□□ -0.74
PTPRA-203ENST00000356147 SPATA31C2B4DYI2 1134 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 TBC1D12O60347 775 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 CSPG5O95196 566 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 NDST1P52848 882 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 ABCE1P61221 599 aaKnown RBP10.41□□□□□ -0.74
PTPRA-203ENST00000356147 MYBPC1Q00872 1141 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 MS4A2Q01362 244 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 LAMTOR4Q0VGL1 99 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 SNAPC2Q13487 334 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 GRM2Q14416 872 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 TBCCQ15814 346 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 AMHR2Q16671 573 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 FAM47CQ5HY64 1035 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 PMF1Q6P1K2 205 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 RTKN2Q8IZC4 609 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 LILRA2Q8N149 483 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 LPAR1Q92633 364 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 LENG1Q96BZ8 264 aaPredicted RBP10.41□□□□□ -0.74
PTPRA-203ENST00000356147 LRGUKQ96M69 825 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 MRPL1Q9BYD6 325 aaKnown RBP10.41□□□□□ -0.74
PTPRA-203ENST00000356147 LHX5Q9H2C1 402 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 TXNDC16Q9P2K2 825 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 COPG2Q9UBF2 871 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 ITGA11Q9UKX5 1188 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 ARHGAP26Q9UNA1 814 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 MAFBQ9Y5Q3 323 aaPredicted RBP10.41□□□□□ -0.74
PTPRA-203ENST00000356147 ENDOD1O94919 500 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 MPSTP25325 297 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 GLRBP48167 497 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 IGBP1P78318 339 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 COG7P83436 770 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 FLOT2Q14254 428 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 JADE1Q6IE81 842 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 MAP7D3Q8IWC1 876 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 NDRG1Q92597 394 aaKnown RBP10.41□□□□□ -0.74
PTPRA-203ENST00000356147 TMIGD2Q96BF3 282 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 DGCR14Q96DF8 476 aaKnown RBP10.41□□□□□ -0.74
PTPRA-203ENST00000356147 TMA16Q96EY4 203 aaKnown RBP10.41□□□□□ -0.74
PTPRA-203ENST00000356147 ZNF512Q96ME7 567 aaPredicted RBP10.41□□□□□ -0.74
PTPRA-203ENST00000356147 AGAP2Q99490 1192 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 APOL2Q9BQE5 337 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 NRDE2Q9H7Z3 1164 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 DNAAF2Q9NVR5 837 aaKnown RBP10.41□□□□□ -0.74
PTPRA-203ENST00000356147 GNEQ9Y223 722 aaKnown RBP10.41□□□□□ -0.74
PTPRA-203ENST00000356147 FIS1Q9Y3D6 152 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 BPTFQ12830 3046 aa10.41□□□□□ -0.74
PTPRA-203ENST00000356147 LACTBL1A8MY62 500 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 XPO1O14980 1071 aaKnown RBP10.4□□□□□ -0.74
PTPRA-203ENST00000356147 GLRA3O75311 464 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 JUNP05412 331 aaKnown RBP10.4□□□□□ -0.74
PTPRA-203ENST00000356147 CPA3P15088 417 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 STAT5BP51692 787 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 CLCN3P51790 818 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 MTTPP55157 894 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 GHRHRQ02643 423 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 TRIP11Q15643 1979 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 LY6KQ17RY6 165 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 ADGRG6Q86SQ4 1221 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 C7orf31Q8N865 590 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 BHLHE22Q8NFJ8 381 aaPredicted RBP10.4□□□□□ -0.74
PTPRA-203ENST00000356147 RCN3Q96D15 328 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 CATSPER2Q96P56 530 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 PKP2Q99959 881 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 NUF2Q9BZD4 464 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 SYBUQ9NX95 663 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 MOCS1Q9NZB8 636 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 ZNF214Q9UL59 606 aaPredicted RBP10.4□□□□□ -0.74
PTPRA-203ENST00000356147 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.4□□□□□ -0.74
PTPRA-203ENST00000356147 PAPSS1O43252 624 aaPredicted RBP10.4□□□□□ -0.74
PTPRA-203ENST00000356147 FOXD2O60548 495 aaPredicted RBP10.4□□□□□ -0.74
PTPRA-203ENST00000356147 FBXO21O94952 628 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 IQCF3P0C7M6 154 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 UBA1P22314 1058 aaKnown RBP10.4□□□□□ -0.74
PTPRA-203ENST00000356147 ENPEPQ07075 957 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 HEATR6Q6AI08 1181 aaKnown RBP10.4□□□□□ -0.74
PTPRA-203ENST00000356147 ACOT1Q86TX2 421 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 SPATA6LQ8N4H0 392 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 CCNYQ8ND76 341 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 ATP2A3Q93084 1043 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 CPB2Q96IY4 423 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 GMLQ99445 158 aa10.4□□□□□ -0.74
PTPRA-203ENST00000356147 CXCL16Q9H2A7 254 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms