RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CRATP43155 626 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 TRAPPC11Q7Z392 1133 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 ZNF222Q9UK12 451 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 INSRP06213 1382 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 SH3D21A4FU49 640 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 SDR42E2A6NKP2 422 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 IGF2BP3O00425 579 aaKnown RBP eCLIP17.6■□□□□ 0.41
COL27A1-201ENST00000356083 RFC5P40937 340 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 PKN1Q16512 942 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 DNAJB3Q8WWF6 145 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 POP1Q99575 1024 aaKnown RBP17.6■□□□□ 0.41
COL27A1-201ENST00000356083 GULP1Q9UBP9 304 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 FAM92AA1XBS5 289 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 PDE5AO76074 875 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 RASAL3Q86YV0 1011 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-201ENST00000356083 AGGF1Q8N302 714 aaeCLIP17.6■□□□□ 0.412e-7■■■■■ 33.5
COL27A1-201ENST00000356083 RNF208Q9H0X6 261 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 GPC6Q9Y625 555 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-201ENST00000356083 ZCWPW2Q504Y3 356 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 ZCCHC2Q9C0B9 1178 aaKnown RBP17.6■□□□□ 0.41
COL27A1-201ENST00000356083 PAIP1Q9H074 479 aaKnown RBP17.6■□□□□ 0.41
COL27A1-201ENST00000356083 RACGAP1Q9H0H5 632 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 RNF19AQ9NV58 838 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 DDX43Q9NXZ2 648 aaKnown RBP17.6■□□□□ 0.41
COL27A1-201ENST00000356083 MAT2BQ9NZL9 334 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 CCDC88CQ9P219 2028 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 AGTP01019 485 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 S100A9P06702 114 aaKnown RBP17.6■□□□□ 0.41
COL27A1-201ENST00000356083 OR56A5P0C7T3 313 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 CACNA2D1P54289 1103 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 SP8Q8IXZ3 490 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 C18orf25Q96B23 403 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-201ENST00000356083 NIF3L1Q9GZT8 377 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 CCDC167Q9P0B6 97 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 KIAA1257Q9ULG3 409 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 EIF2B2P49770 351 aaKnown RBP17.6■□□□□ 0.41
COL27A1-201ENST00000356083 NDUFV1P49821 464 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 GPRC5CQ9NQ84 441 aa17.6■□□□□ 0.41
COL27A1-201ENST00000356083 ZNF839A8K0R7 811 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 STX16-NPEPL1H3BU86 382 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 STX16O14662 325 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 SSNA1O43805 119 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 ZBTB14O43829 449 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 GSTM5P46439 218 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 HK2P52789 917 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 FAM98BQ52LJ0 330 aaKnown RBP17.59■□□□□ 0.41
COL27A1-201ENST00000356083 KLHL12Q53G59 568 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 WDR60Q8WVS4 1066 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 CBWD1Q9BRT8 395 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 CMTM6Q9NX76 183 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 DAPK2Q9UIK4 370 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 A0A088AWK7 358 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 WWP2O00308 870 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 HOXA2O43364 376 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 ZNF10P21506 573 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-201ENST00000356083 CXorf40BQ96DE9 158 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 MILR1Q7Z6M3 343 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 SNTG2Q9NY99 539 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 ZNF70Q9UC06 446 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-201ENST00000356083 MAGEB3O15480 346 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 JAMLQ86YT9 394 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 A1CFQ9NQ94 594 aaKnown RBP17.59■□□□□ 0.41
COL27A1-201ENST00000356083 MBD2Q9UBB5 411 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 STAP2Q9UGK3 403 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 WBP11Q9Y2W2 641 aaKnown RBP17.59■□□□□ 0.41
COL27A1-201ENST00000356083 TAL1P17542 331 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-201ENST00000356083 EIF2S3P41091 472 aaKnown RBP17.59■□□□□ 0.41
COL27A1-201ENST00000356083 ADIGQ0VDE8 80 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 SPATA20Q8TB22 786 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 RAD54BQ9Y620 910 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 A0A1W2PRG6 482 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 PDXKO00764 312 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 RGL2O15211 777 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 PLEKP08567 350 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-201ENST00000356083 GHRP10912 638 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 CASP4P49662 377 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 TBCELQ5QJ74 424 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 TMEM132CQ8N3T6 1108 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 PCSK9Q8NBP7 692 aaKnown RBP17.59■□□□□ 0.41
COL27A1-201ENST00000356083 CXorf40AQ8TE69 158 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 ATG4AQ8WYN0 398 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 TP53INP1Q96A56 240 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 TMEM121Q9BTD3 319 aa17.59■□□□□ 0.41
COL27A1-201ENST00000356083 TPBGLP0DKB5 382 aa17.58■□□□□ 0.41
COL27A1-201ENST00000356083 HSD17B3P37058 310 aa17.58■□□□□ 0.41
COL27A1-201ENST00000356083 OMPP47874 163 aa17.58■□□□□ 0.41
COL27A1-201ENST00000356083 POU5F1Q01860 360 aaKnown RBP17.58■□□□□ 0.41
COL27A1-201ENST00000356083 OASLQ15646 514 aaKnown RBP17.58■□□□□ 0.41
COL27A1-201ENST00000356083 CES3Q6UWW8 571 aa17.58■□□□□ 0.41
COL27A1-201ENST00000356083 PARP8Q8N3A8 854 aa17.58■□□□□ 0.41
COL27A1-201ENST00000356083 ARIH1Q9Y4X5 557 aaPredicted RBP17.58■□□□□ 0.41
COL27A1-201ENST00000356083 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.41
COL27A1-201ENST00000356083 PDX1P52945 283 aa17.58■□□□□ 0.41
COL27A1-201ENST00000356083 ZBTB49Q6ZSB9 765 aa17.58■□□□□ 0.41
COL27A1-201ENST00000356083 NOL6Q9H6R4 1146 aaKnown RBP17.58■□□□□ 0.41
COL27A1-201ENST00000356083 LOC102724159A0A0B4J2E5 919 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 FMO4P31512 558 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 BCL2L1Q07817 233 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 PWP2Q15269 919 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms