RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 WDR12Q9GZL7 423 aaKnown RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 CLPBQ9H078 707 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 VRTNQ9H8Y1 702 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 FANCEQ9HB96 536 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 KCNQ5Q9NR82 932 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 KCNN3Q9UGI6 736 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 KIAA1024Q9UPX6 916 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 POLRMTO00411 1230 aaKnown RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 LIASO43766 372 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 DDHD2O94830 711 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 HSPA1AP0DMV8 641 aaKnown RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 HSPA1BP0DMV9 641 aaKnown RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 ETS1P14921 441 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 ZNF135P52742 658 aaPredicted RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 STX1BP61266 288 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 TRPC3Q13507 836 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 MAPRE1Q15691 268 aaKnown RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 TJAP1Q5JTD0 557 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 INTS5Q6P9B9 1019 aaKnown RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 TTC33Q6PID6 262 aaPredicted RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 PLEKHG7Q6ZR37 379 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 TOR1AIP2Q8NFQ8 470 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 PIWIL2Q8TC59 973 aaKnown RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 PDCD6IPQ8WUM4 868 aaKnown RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 VTI1AQ96AJ9 217 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 ZNF778Q96MU6 729 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 RMDN3Q96TC7 470 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 HMG20AQ9NP66 347 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 SUCOQ9UBS9 1254 aaKnown RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 NXF1Q9UBU9 619 aaKnown RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 USP17L12C9JPN9 530 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 USP17L21D6R901 530 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 HTRA2O43464 458 aaPredicted RBP16.13■□□□□ 0.17
RTN3-205ENST00000356000 TSPAN1O60635 241 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 KRT10P13645 584 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 DNASE1L3Q13609 305 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 NPTX1Q15818 432 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 PIGGQ5H8A4 983 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 FSCBQ5H9T9 825 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 NHSL2Q5HYW2 709 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 REXO1Q8N1G1 1221 aaKnown RBP16.13■□□□□ 0.17
RTN3-205ENST00000356000 ZNF786Q8N393 782 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 DPF3Q92784 378 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 PEX13Q92968 403 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 RMDN1Q96DB5 314 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 FEM1CQ96JP0 617 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 KLHL32Q96NJ5 620 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 TUBA1CQ9BQE3 449 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 POLR1BQ9H9Y6 1135 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 NOCTQ9UK39 431 aaKnown RBP16.13■□□□□ 0.17
RTN3-205ENST00000356000 SLC27A5Q9Y2P5 690 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 ZHX2Q9Y6X8 837 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 CYB561D2O14569 222 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 TNPO2O14787 897 aaKnown RBP16.13■□□□□ 0.17
RTN3-205ENST00000356000 STARD3NLO95772 234 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 TSHRP16473 764 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 MAPK4P31152 587 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 MS4A2Q01362 244 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 MSS51Q4VC12 460 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 UGT3A1Q6NUS8 523 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 ARCQ7LC44 396 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 ABHD11Q8NFV4 315 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 GABPB2Q8TAK5 448 aaPredicted RBP16.13■□□□□ 0.17
RTN3-205ENST00000356000 LMO3Q8TAP4 145 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 RASSF5Q8WWW0 418 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 TFAP2CQ92754 450 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 CDK5RAP1Q96SZ6 601 aaKnown RBP16.13■□□□□ 0.17
RTN3-205ENST00000356000 SENP7Q9BQF6 1050 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 TMEM260Q9NX78 707 aa16.13■□□□□ 0.17
RTN3-205ENST00000356000 TAF4O00268 1085 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 CCRL2O00421 344 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 AKAP10O43572 662 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 BCAS2O75934 225 aaPredicted RBP16.12■□□□□ 0.17
RTN3-205ENST00000356000 KRT3P12035 628 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 NCAM1P13591 858 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 SLC12A3P55017 1021 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 MRPS5P82675 430 aaKnown RBP16.12■□□□□ 0.17
RTN3-205ENST00000356000 EVX2Q03828 476 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 TRIM28Q13263 835 aaKnown RBP16.12■□□□□ 0.17
RTN3-205ENST00000356000 ALCAMQ13740 583 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 TUBA3CQ13748 450 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 DRICH1Q6PGQ1 229 aaPredicted RBP16.12■□□□□ 0.17
RTN3-205ENST00000356000 ELMOD2Q8IZ81 293 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 ZBTB38Q8NAP3 1195 aaPredicted RBP16.12■□□□□ 0.17
RTN3-205ENST00000356000 FBXO36Q8NEA4 188 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 COQ7Q99807 217 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 OR2B2Q9GZK3 357 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 RUBCNLQ9H714 662 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 DUS2Q9NX74 493 aaKnown RBP16.12■□□□□ 0.17
RTN3-205ENST00000356000 ANAPC7Q9UJX3 599 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 SPEF1Q9Y4P9 236 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 LTBP3Q9NS15 1303 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 GOLGA8SH3BPF8 625 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 NOP56O00567 594 aaKnown RBP16.12■□□□□ 0.17
RTN3-205ENST00000356000 SGPL1O95470 568 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 BPGMP07738 259 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 CYP19A1P11511 503 aaPredicted RBP16.12■□□□□ 0.17
RTN3-205ENST00000356000 GLULP15104 373 aa16.12■□□□□ 0.17
RTN3-205ENST00000356000 RFC1P35251 1148 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms