RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ELMSAN1Q6PJG2 1045 aa16.1■□□□□ 0.17
CTSA-202ENST00000354880 TMCO3Q6UWJ1 677 aa16.1■□□□□ 0.17
CTSA-202ENST00000354880 CCNI2Q6ZMN8 369 aaPredicted RBP16.1■□□□□ 0.17
CTSA-202ENST00000354880 CASKIN2Q8WXE0 1202 aa16.1■□□□□ 0.17
CTSA-202ENST00000354880 PLD4Q96BZ4 506 aa16.1■□□□□ 0.17
CTSA-202ENST00000354880 TIFAQ96CG3 184 aa16.1■□□□□ 0.17
CTSA-202ENST00000354880 TBC1D31Q96DN5 1066 aa16.1■□□□□ 0.17
CTSA-202ENST00000354880 TRIM31Q9BZY9 425 aa16.1■□□□□ 0.17
CTSA-202ENST00000354880 ATXN3LQ9H3M9 355 aa16.1■□□□□ 0.17
CTSA-202ENST00000354880 NEU3Q9UQ49 428 aa16.1■□□□□ 0.17
CTSA-202ENST00000354880 DOCK6Q96HP0 2047 aa16.1■□□□□ 0.17
CTSA-202ENST00000354880 A0A1W2PRU2 124 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 E9PAM4 449 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 H7C0C1 242 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 SGK1O00141 431 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 MFSD11O43934 449 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 XYLBO75191 536 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 OLFM2O95897 454 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 MBL2P11226 248 aaPredicted RBP16.09■□□□□ 0.17
CTSA-202ENST00000354880 MYL4P12829 197 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 PTPN2P17706 415 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 ATP5OP48047 213 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 CARSP49589 748 aaKnown RBP16.09■□□□□ 0.17
CTSA-202ENST00000354880 DRG2P55039 364 aaKnown RBP16.09■□□□□ 0.17
CTSA-202ENST00000354880 CYP4F8P98187 520 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 AUHQ13825 339 aaKnown RBP16.09■□□□□ 0.17
CTSA-202ENST00000354880 PTK6Q13882 451 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 TRADDQ15628 312 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 PDZD4Q76G19 769 aaPredicted RBP16.09■□□□□ 0.17
CTSA-202ENST00000354880 C14orf80Q86SX3 495 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 IFT81Q8WYA0 676 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 SLC22A12Q96S37 553 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 KLF16Q9BXK1 252 aaPredicted RBP16.09■□□□□ 0.17
CTSA-202ENST00000354880 DPH5Q9H2P9 285 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 C10orf88Q9H8K7 445 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 FAM114A2Q9NRY5 505 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 HCFC1R1Q9NWW0 138 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 ZDHHC7Q9NXF8 308 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 NEU2Q9Y3R4 380 aa16.09■□□□□ 0.17
CTSA-202ENST00000354880 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 FGF10O15520 208 aaPredicted RBP16.08■□□□□ 0.17
CTSA-202ENST00000354880 ERLIN1O75477 346 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 FGF19O95750 216 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 KRT14P02533 472 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 MYBL2P10244 700 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 HDCP19113 662 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 SERPINB6P35237 376 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 EPHA5P54756 1037 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 XRCC4Q13426 336 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 CUL1Q13616 776 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 ARTNQ5T4W7 220 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 DARS2Q6PI48 645 aaKnown RBP16.08■□□□□ 0.17
CTSA-202ENST00000354880 LRRC31Q6UY01 552 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 DDX42Q86XP3 938 aaKnown RBP eCLIP16.08■□□□□ 0.17
CTSA-202ENST00000354880 ARL14EPQ8N8R7 260 aaPredicted RBP16.08■□□□□ 0.17
CTSA-202ENST00000354880 CCDC89Q8N998 374 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 RSAD2Q8WXG1 361 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 CYP2S1Q96SQ9 504 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 CATSPERBQ9H7T0 1116 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 GKN1Q9NS71 199 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 ASIC3Q9UHC3 531 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 VANGL2Q9ULK5 521 aa16.08■□□□□ 0.17
CTSA-202ENST00000354880 CLUHO75153 1309 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 REV3LO60673 3130 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 STC2O76061 302 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 STIP1P31948 543 aaKnown RBP16.08■□□□□ 0.16
CTSA-202ENST00000354880 NRIP1P48552 1158 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 SLC11A2P49281 568 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 CLCN6P51797 869 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 SMAD3P84022 425 aaKnown RBP16.08■□□□□ 0.16
CTSA-202ENST00000354880 TRIP13Q15645 432 aaPredicted RBP16.08■□□□□ 0.16
CTSA-202ENST00000354880 DUSP6Q16828 381 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 RAP1GAP2Q684P5 730 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 ZNF683Q8IZ20 524 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 MAB21L3Q8N8X9 362 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 EIF1ADQ8N9N8 165 aaKnown RBP16.08■□□□□ 0.16
CTSA-202ENST00000354880 CCHCR1Q8TD31 782 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 OLFM3Q96PB7 478 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 DNMT3BQ9UBC3 853 aaKnown RBP16.08■□□□□ 0.16
CTSA-202ENST00000354880 SNX24Q9Y343 169 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 RAD54BQ9Y620 910 aa16.08■□□□□ 0.16
CTSA-202ENST00000354880 BCLAF3A2AJT9 711 aaKnown RBP16.07■□□□□ 0.16
CTSA-202ENST00000354880 CFAP69A5D8W1 941 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 ACSL4O60488 711 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 IFNB1P01574 187 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 RHOP08100 348 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 IRF1P10914 325 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 GJA1P17302 382 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 CCR2P41597 374 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 RPL21P46778 160 aaKnown RBP16.07■□□□□ 0.16
CTSA-202ENST00000354880 GDF10P55107 478 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 PDK1Q15118 436 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 MAP9Q49MG5 647 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 ZNF697Q5TEC3 545 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 B4GALNT4Q76KP1 1039 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 CDKL3Q8IVW4 592 aaPredicted RBP16.07■□□□□ 0.16
CTSA-202ENST00000354880 GSPT2Q8IYD1 628 aaKnown RBP16.07■□□□□ 0.16
CTSA-202ENST00000354880 GLIS1Q8NBF1 620 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 LEMD2Q8NC56 503 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 HNRNPLLQ8WVV9 542 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms