RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 FZD10Q9ULW2 581 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 ARHGAP42A6NI28 874 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 DGKIO75912 1065 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 MATKP42679 507 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 TUBP50607 506 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 SLC25A3Q00325 362 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 ARHGAP17Q68EM7 881 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 HFE2Q6ZVN8 426 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 UNC93AQ86WB7 457 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 OR52K1Q8NGK4 314 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 DNAJB3Q8WWF6 145 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 ARNTL2Q8WYA1 636 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 ZNF333Q96JL9 665 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 ADAMTS10Q9H324 1103 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 PLEKHA5Q9HAU0 1116 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 VTA1Q9NP79 307 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 MRPL42Q9Y6G3 142 aaKnown RBP20.11■□□□□ 0.81
COL13A1-201ENST00000354547 SNNO75324 88 aaPredicted RBP20.11■□□□□ 0.81
COL13A1-201ENST00000354547 GCKP35557 465 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 IFRD2Q12894 506 aaPredicted RBP20.11■□□□□ 0.81
COL13A1-201ENST00000354547 ATG14Q6ZNE5 492 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 ZNF567Q8N184 647 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 ARHGAP24Q8N264 748 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 LRRC52Q8N7C0 313 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 TMEM40Q8WWA1 233 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 MED10Q9BTT4 135 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 DPPA5A6NC42 116 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 FAM72CH0Y354 149 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 STK10O94804 968 aaKnown RBP20.1■□□□□ 0.81
COL13A1-201ENST00000354547 GSRP00390 522 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 ITGA2BP08514 1039 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 GSTA2P09210 222 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 PEX6Q13608 980 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 FAM72AQ5TYM5 149 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 FAM72DQ6L9T8 149 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 C4orf22Q6V702 233 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 RIPOR1Q6ZS17 1223 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 ZNF410Q86VK4 478 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 FAM72BQ86X60 149 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 WDR75Q8IWA0 830 aaKnown RBP20.1■□□□□ 0.81
COL13A1-201ENST00000354547 ATP2A3Q93084 1043 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 MOCOSQ96EN8 888 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 PPP1R12CQ9BZL4 782 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 TMEM216Q9P0N5 145 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 KLHL8Q9P2G9 620 aaPredicted RBP20.1■□□□□ 0.81
COL13A1-201ENST00000354547 USP3Q9Y6I4 520 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 GOLGA8TH3BQL2 631 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 HUS1O60921 280 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 CYP2C9P11712 490 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 DGKDQ16760 1214 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 C1orf146Q5VVC0 180 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 OSTM1Q86WC4 334 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 ULK2Q8IYT8 1036 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 EFCAB3Q8N7B9 438 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 OLFM3Q96PB7 478 aa20.1■□□□□ 0.81
COL13A1-201ENST00000354547 UBQLN1Q9UMX0 589 aaKnown RBP20.1■□□□□ 0.81
COL13A1-201ENST00000354547 RPL26L1Q9UNX3 145 aaKnown RBP20.1■□□□□ 0.81
COL13A1-201ENST00000354547 LOC100653049A0A140TA62 436 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 KRT34O76011 436 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 IL1BP01584 269 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 FDFT1P37268 417 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 PGGT1BP53609 377 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 TEDDM1Q5T9Z0 273 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 MBLAC2Q68D91 279 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 TMEM154Q6P9G4 183 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 DNAAF3Q8N9W5 541 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 PIWIL2Q8TC59 973 aaKnown RBP20.09■□□□□ 0.81
COL13A1-201ENST00000354547 SLC10A4Q96EP9 437 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 CCDC106Q9BWC9 280 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 CYP4F11Q9HBI6 524 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 LRRC4Q9HBW1 653 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 UBP1Q9NZI7 540 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 ZNF638Q14966 1978 aaKnown RBP20.09■□□□□ 0.81
COL13A1-201ENST00000354547 ATP9BO43861 1147 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 CIB2O75838 187 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 USP1O94782 785 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 FGF3P11487 239 aaPredicted RBP20.09■□□□□ 0.81
COL13A1-201ENST00000354547 NCF2P19878 526 aaPredicted RBP20.09■□□□□ 0.81
COL13A1-201ENST00000354547 SAT1P21673 171 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 MAP3K7CLP57077 242 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 SNAPC2Q13487 334 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 ITGA9Q13797 1035 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 SLC25A52Q3SY17 297 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 EFHC1Q5JVL4 640 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 SLC7A14Q8TBB6 771 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 PANX3Q96QZ0 392 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 CAB39LQ9H9S4 337 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 MORF4L1Q9UBU8 362 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 SLC7A8Q9UHI5 535 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 TIMM13Q9Y5L4 95 aaPredicted RBP20.09■□□□□ 0.81
COL13A1-201ENST00000354547 COL1A2P08123 1366 aa20.09■□□□□ 0.81
COL13A1-201ENST00000354547 PDHXO00330 501 aa20.08■□□□□ 0.81
COL13A1-201ENST00000354547 EEF2KO00418 725 aaKnown RBP20.08■□□□□ 0.81
COL13A1-201ENST00000354547 BIRC5O15392 142 aa20.08■□□□□ 0.81
COL13A1-201ENST00000354547 PLIN3O60664 434 aa20.08■□□□□ 0.81
COL13A1-201ENST00000354547 GPR32O75388 356 aa20.08■□□□□ 0.81
COL13A1-201ENST00000354547 EPHB1P54762 984 aa20.08■□□□□ 0.81
COL13A1-201ENST00000354547 CCNA1P78396 465 aa20.08■□□□□ 0.81
COL13A1-201ENST00000354547 LRRC8BQ6P9F7 803 aa20.08■□□□□ 0.81
COL13A1-201ENST00000354547 HIPK4Q8NE63 616 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms