RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PCDHA5Q9Y5H7 936 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 TEX15Q9BXT5 2789 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 USP9XQ93008 2570 aaPredicted RBP16.56■□□□□ 0.24
DDX55-202ENST00000354291 A0A1W2PR77 199 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 SLC12A8A0AV02 714 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 LRRC72A6NJI9 287 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 ACP1P24666 158 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 HLA-FP30511 346 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 HOXD13P35453 343 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 PSEN1P49768 467 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 NXPH1P58417 271 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 SNRPFP62306 86 aaKnown RBP16.55■□□□□ 0.24
DDX55-202ENST00000354291 NFATC3Q12968 1075 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 FAM26FQ5R3K3 315 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 CLEC20AQ6ZU45 233 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 USP30Q70CQ3 517 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 UNC13DQ70J99 1090 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 EPM2AIP1Q7L775 607 aaPredicted RBP16.55■□□□□ 0.24
DDX55-202ENST00000354291 CRYBG2Q8N1P7 616 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 CPXM2Q8N436 756 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 SERAC1Q96JX3 654 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 DPH1Q9BZG8 443 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 NEUROG2Q9H2A3 272 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 PABPC3Q9H361 631 aaKnown RBP16.55■□□□□ 0.24
DDX55-202ENST00000354291 ABCB8Q9NUT2 735 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 SERGEFQ9UGK8 458 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 HMGXB4Q9UGU5 601 aa16.55■□□□□ 0.24
DDX55-202ENST00000354291 PVALEFA0A1B0GWK0 134 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 A0A1W2PP55 124 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 SIGLEC6O43699 453 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 USP12O75317 370 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 RNASEH2AO75792 299 aaKnown RBP16.54■□□□□ 0.24
DDX55-202ENST00000354291 C7P10643 843 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 RXRGP48443 463 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 CASP4P49662 377 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 KIF11P52732 1056 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 DAB2P98082 770 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 NCOA4Q13772 614 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 KCNJ12Q14500 433 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 MPPE1Q53F39 396 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 SLC45A4Q5BKX6 768 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 SFMBT2Q5VUG0 894 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 RESP18Q5W5W9 173 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 ADIPOR2Q86V24 386 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 XXYLT1Q8NBI6 393 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 WFIKKN2Q8TEU8 576 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 CDK5RAP1Q96SZ6 601 aaKnown RBP16.54■□□□□ 0.24
DDX55-202ENST00000354291 OMDQ99983 421 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 GZF1Q9H116 711 aaPredicted RBP16.54■□□□□ 0.24
DDX55-202ENST00000354291 AGPAT3Q9NRZ7 376 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 MARCH2Q9P0N8 246 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 STRIP2Q9ULQ0 834 aa16.54■□□□□ 0.24
DDX55-202ENST00000354291 UBE4BO95155 1302 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 MID1O15344 667 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 RNASEH1O60930 286 aaKnown RBP16.53■□□□□ 0.24
DDX55-202ENST00000354291 SDC3O75056 442 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 ATP5BP06576 529 aaKnown RBP16.53■□□□□ 0.24
DDX55-202ENST00000354291 DLDP09622 509 aaKnown RBP16.53■□□□□ 0.24
DDX55-202ENST00000354291 HOXD9P28356 352 aaPredicted RBP16.53■□□□□ 0.24
DDX55-202ENST00000354291 ERVPABLB-1P60509 514 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 SFSWAPQ12872 951 aaKnown RBP16.53■□□□□ 0.24
DDX55-202ENST00000354291 PROX2Q3B8N5 592 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 MBLAC2Q68D91 279 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 RSRC2Q7L4I2 434 aaKnown RBP16.53■□□□□ 0.24
DDX55-202ENST00000354291 ZNF276Q8N554 614 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 OXR1Q8N573 874 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 OR2T34Q8NGX1 318 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 CYFIP2Q96F07 1278 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 VCPIP1Q96JH7 1222 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 RSPH9Q9H1X1 276 aaPredicted RBP16.53■□□□□ 0.24
DDX55-202ENST00000354291 VRTNQ9H8Y1 702 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 ERVMER34-1Q9H9K5 563 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 CLIC5Q9NZA1 410 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 CGNQ9P2M7 1197 aaKnown RBP16.53■□□□□ 0.24
DDX55-202ENST00000354291 GGA2Q9UJY4 613 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 RCOR1Q9UKL0 485 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 SCML1Q9UN30 329 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 DOPEY2Q9Y3R5 2298 aa16.53■□□□□ 0.24
DDX55-202ENST00000354291 UBR5O95071 2799 aaPredicted RBP16.53■□□□□ 0.24
DDX55-202ENST00000354291 AHCTF1Q8WYP5 2266 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 TRIM38O00635 465 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 TGFB1I1O43294 461 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 PABPC1P11940 636 aaKnown RBP16.52■□□□□ 0.24
DDX55-202ENST00000354291 P4HA1P13674 534 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 POLR2EP19388 210 aaKnown RBP16.52■□□□□ 0.24
DDX55-202ENST00000354291 LSSP48449 732 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 DNM1Q05193 864 aaKnown RBP16.52■□□□□ 0.24
DDX55-202ENST00000354291 EHHADHQ08426 723 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 PKP1Q13835 747 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 C6orf132Q5T0Z8 1188 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 KANSL1Q7Z3B3 1105 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 CCDC186Q7Z3E2 898 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 SPATS2Q86XZ4 545 aaKnown RBP16.52■□□□□ 0.24
DDX55-202ENST00000354291 ZC3H3Q8IXZ2 948 aaKnown RBP16.52■□□□□ 0.24
DDX55-202ENST00000354291 CEP57L1Q8IYX8 460 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 AHI1Q8N157 1196 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 SNRNP27Q8WVK2 155 aaKnown RBP16.52■□□□□ 0.24
DDX55-202ENST00000354291 TMA16Q96EY4 203 aaKnown RBP16.52■□□□□ 0.24
DDX55-202ENST00000354291 OSBPL2Q9H1P3 480 aa16.52■□□□□ 0.24
DDX55-202ENST00000354291 BLZF1Q9H2G9 400 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms