RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 HYOU1Q9Y4L1 999 aa22.91■■□□□ 1.26
SHMT1-203ENST00000354098 FAM72CH0Y354 149 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 PRPSAP2O60256 369 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 BUB1BO60566 1050 aaPredicted RBP22.9■■□□□ 1.26
SHMT1-203ENST00000354098 CYBBP04839 570 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 OPRD1P41143 372 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 IRAK1P51617 712 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 SIGLEC14Q08ET2 396 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 SCAPQ12770 1279 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 FAM72AQ5TYM5 149 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 FAM72DQ6L9T8 149 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 FAM72BQ86X60 149 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 ZNF683Q8IZ20 524 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 C8orf33Q9H7E9 229 aaPredicted RBP22.9■■□□□ 1.26
SHMT1-203ENST00000354098 STIM2Q9P246 746 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 OR12D3Q9UGF7 316 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 PI4K2BG5E9Z4 385 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 TNFRSF10AO00220 468 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 TRIM24O15164 1050 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 TBL1XO60907 577 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 SRGAP2O75044 1071 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 CCDC175P0C221 793 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 ALADP13716 330 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 HOXD9P28356 352 aaPredicted RBP22.9■■□□□ 1.26
SHMT1-203ENST00000354098 SSR1P43307 286 aaKnown RBP22.9■■□□□ 1.26
SHMT1-203ENST00000354098 TAS2R40P59535 323 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 SLC25A11Q02978 314 aaKnown RBP22.9■■□□□ 1.26
SHMT1-203ENST00000354098 MESP2Q0VG99 397 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 CA9Q16790 459 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 KCNT1Q5JUK3 1230 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 ERMARDQ5T6L9 678 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 RALGPS2Q86X27 583 aaPredicted RBP22.9■■□□□ 1.26
SHMT1-203ENST00000354098 TPCN2Q8NHX9 752 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 NCAPGQ9BPX3 1015 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 SNRNP25Q9BV90 132 aaKnown RBP22.9■■□□□ 1.26
SHMT1-203ENST00000354098 OSBPL2Q9H1P3 480 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 ZWILCHQ9H900 591 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 FBRSL1Q9HCM7 1045 aaKnown RBP22.9■■□□□ 1.26
SHMT1-203ENST00000354098 LCMT1Q9UIC8 334 aa22.9■■□□□ 1.26
SHMT1-203ENST00000354098 MACROD2A1Z1Q3 448 aa22.89■■□□□ 1.25
SHMT1-203ENST00000354098 GLULP15104 373 aa22.89■■□□□ 1.25
SHMT1-203ENST00000354098 MAN1A1P33908 653 aa22.89■■□□□ 1.25
SHMT1-203ENST00000354098 AIF1P55008 147 aa22.89■■□□□ 1.25
SHMT1-203ENST00000354098 NAP1L1P55209 391 aaKnown RBP22.89■■□□□ 1.25
SHMT1-203ENST00000354098 SMTNL2Q2TAL5 461 aa22.89■■□□□ 1.25
SHMT1-203ENST00000354098 EFHC2Q5JST6 749 aa22.89■■□□□ 1.25
SHMT1-203ENST00000354098 TRIM67Q6ZTA4 783 aa22.89■■□□□ 1.25
SHMT1-203ENST00000354098 CIR1Q86X95 450 aaPredicted RBP22.89■■□□□ 1.25
SHMT1-203ENST00000354098 ETFBKMTQ8IXQ9 262 aa22.89■■□□□ 1.25
SHMT1-203ENST00000354098 RPRD1AQ96P16 312 aaPredicted RBP22.89■■□□□ 1.25
SHMT1-203ENST00000354098 AP4E1Q9UPM8 1137 aa22.89■■□□□ 1.25
SHMT1-203ENST00000354098 E9PAM4 449 aa22.88■■□□□ 1.25
SHMT1-203ENST00000354098 CACNG3O60359 315 aa22.88■■□□□ 1.25
SHMT1-203ENST00000354098 GALK1P51570 392 aa22.88■■□□□ 1.25
SHMT1-203ENST00000354098 TXLNBQ8N3L3 684 aa22.88■■□□□ 1.25
SHMT1-203ENST00000354098 HJURPQ8NCD3 748 aaPredicted RBP22.88■■□□□ 1.25
SHMT1-203ENST00000354098 PPP2R2CQ9Y2T4 447 aa22.88■■□□□ 1.25
SHMT1-203ENST00000354098 TULP3O75386 442 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 RARAP10276 462 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 COMTP21964 271 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 PRKCQQ04759 706 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 PON2Q15165 354 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 ATP13A4Q4VNC1 1196 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 FAM3CQ92520 227 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 IRX2Q9BZI1 471 aaPredicted RBP22.87■■□□□ 1.25
SHMT1-203ENST00000354098 DHX35Q9H5Z1 703 aaKnown RBP22.87■■□□□ 1.25
SHMT1-203ENST00000354098 EPHX3Q9H6B9 360 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 MPP6Q9NZW5 540 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 ALG6Q9Y672 507 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 CNTN5O94779 1100 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 MOCS3O95396 460 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 PDGFBP01127 241 aaPredicted RBP22.87■■□□□ 1.25
SHMT1-203ENST00000354098 STARD6P59095 220 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 AMPD2Q01433 879 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 C5orf22Q49AR2 442 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 ALFQ53S48 1182 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 MPP7Q5T2T1 576 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 ASTLQ6HA08 431 aaPredicted RBP22.87■■□□□ 1.25
SHMT1-203ENST00000354098 LRRC31Q6UY01 552 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 WFDC5Q8TCV5 224 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 HSPH1Q92598 858 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 XPO6Q96QU8 1125 aaKnown RBP22.87■■□□□ 1.25
SHMT1-203ENST00000354098 P2RY13Q9BPV8 354 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 DNAJC17Q9NVM6 304 aaKnown RBP22.87■■□□□ 1.25
SHMT1-203ENST00000354098 GUCA1BQ9UMX6 200 aa22.87■■□□□ 1.25
SHMT1-203ENST00000354098 IGLV3-10A0A075B6K4 115 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 DRGXA6NNA5 263 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 LRIG2O94898 1065 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 GJC1P36383 396 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 NRG1Q02297 640 aaPredicted RBP22.86■■□□□ 1.25
SHMT1-203ENST00000354098 SEMA3BQ13214 749 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 HADHQ16836 314 aaKnown RBP22.86■■□□□ 1.25
SHMT1-203ENST00000354098 BOLA3Q53S33 107 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 RABGAP1LQ5R372 815 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 ACBD5Q5T8D3 534 aaPredicted RBP22.86■■□□□ 1.25
SHMT1-203ENST00000354098 MANEALQ5VSG8 457 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 RNF43Q68DV7 783 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 ZNF852Q6ZMS4 543 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 CD101Q93033 1021 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 KCTD15Q96SI1 283 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms