RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 HOXC13P31276 330 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 LIPAP38571 399 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 WNT3P56703 355 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 LOXL3P58215 753 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 RAE1P78406 368 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ADAM17P78536 824 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 GAB1Q13480 694 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 KCNMB1Q16558 191 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 GEN1Q17RS7 908 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ALG11Q2TAA5 492 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 NRN1LQ496H8 165 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 SLC10A5Q5PT55 438 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 MCTP1Q6DN14 999 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 USP17L6PQ6QN14 398 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 LAYNQ6UX15 382 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 SERPINA13PQ6UXR4 307 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ADGRG5Q8IZF4 528 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ABRAQ8N0Z2 381 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ADSSL1Q8N142 457 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 R3HDM4Q96D70 268 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 CALML4Q96GE6 196 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 MASTLQ96GX5 879 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TIGD1Q96MW7 591 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 PLA2G12BQ9BX93 195 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TMEM168Q9H0V1 697 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 IKZF4Q9H2S9 585 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF768Q9H5H4 540 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 SHOC2Q9UQ13 582 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 CSMD1Q96PZ7 3565 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ZFHX2Q9C0A1 2572 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TDRD9Q8NDG6 1382 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 CCDC195A0A1B0GUA6 201 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 C17orf113A0A1B0GUU1 675 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 NPIPB13A6NJU9 1138 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 NPIPB5A8MRT5 1133 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 NPIPB4C9JG80 1138 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 PER2O15055 1255 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 MUSKO15146 869 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TFRCP02786 760 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ATXN1LP0C7T5 689 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ARSAP15289 507 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 NFKBIAP25963 317 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TTKP33981 857 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 PPARGP37231 505 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 NDUFV1P49821 464 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 RCAN1P53805 252 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 RNASE9P60153 205 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 SHC2P98077 582 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 SATB1Q01826 763 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 STK4Q13043 487 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 MAMLD1Q13495 774 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ACOX1Q15067 660 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ELAVL1Q15717 326 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 PDCD4Q53EL6 469 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 KIAA0930Q6ICG6 404 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TMEM132EQ6IEE7 984 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 EFCAB12Q6NXP0 572 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 SUSD1Q6UWL2 747 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ATG4DQ86TL0 474 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 CHCHD4Q8N4Q1 142 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TTLL6Q8N841 843 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 OR52N2Q8NGI0 321 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ATRIPQ8WXE1 791 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 GLG1Q92896 1179 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 OR14A2Q96R54 314 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TCF25Q9BQ70 676 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 RANBP17Q9H2T7 1088 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TBC1D14Q9P2M4 693 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 FBXO4Q9UKT5 387 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ISY1Q9ULR0 285 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 HDAC5Q9UQL6 1122 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 KCNE2Q9Y6J6 123 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ABCA3Q99758 1704 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 SMTNL1A8MU46 457 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 F5H697 171 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 H7C0S8 307 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 GTPBP1O00178 669 aaKnown RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 AP4M1O00189 453 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 CHL1O00533 1208 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 SH2B2O14492 632 aaPredicted RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 NRP1O14786 923 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 PJA2O43164 708 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 TACC1O75410 805 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 WNT11O96014 354 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 MED14OSP0DP75 135 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 GLDCP23378 1020 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 PSMC2P35998 433 aaKnown RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 CPA2P48052 419 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 B4GALNT1Q00973 533 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 CAMK2DQ13557 499 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 NFIXQ14938 502 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 CYP1B1Q16678 543 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 ARL13AQ5H913 290 aaPredicted RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 B3GNTL1Q67FW5 361 aaPredicted RBP1.78□□□□□ -2.13
BRCA1-202ENST00000354071 FAM111BQ6SJ93 734 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 MTHFD1LQ6UB35 978 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 LRRC55Q6ZSA7 311 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 MOB3CQ70IA8 216 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 LRRC8DQ7L1W4 858 aa1.78□□□□□ -2.13
BRCA1-202ENST00000354071 RTL10Q7L3V2 364 aa1.78□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms