RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PGBD4Q96DM1 585 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 NSL1Q96IY1 281 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 B3GALT6Q96L58 329 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 CASD1Q96PB1 797 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 FAM111AQ96PZ2 611 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 KCNK16Q96T55 309 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 TMEM120AQ9BXJ8 343 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 SLC4A5Q9BY07 1137 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 TAS2R1Q9NYW7 299 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 STOML1Q9UBI4 398 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 XPO7Q9UIA9 1087 aaKnown RBP8.88□□□□□ -0.99
TRIM55-204ENST00000353317 TBX21Q9UL17 535 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 CHMP2BQ9UQN3 213 aa8.88□□□□□ -0.99
TRIM55-204ENST00000353317 TRIM43BA6NCK2 446 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 NVLO15381 856 aaKnown RBP8.87□□□□□ -0.99
TRIM55-204ENST00000353317 MAP3K13O43283 966 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 DNAJC6O75061 913 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 TBX10O75333 385 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 CXCL10P02778 98 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 PSMA2P25787 234 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 RPL9P32969 192 aaKnown RBP8.87□□□□□ -0.99
TRIM55-204ENST00000353317 BCAR1P56945 870 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 BASP1P80723 227 aaKnown RBP8.87□□□□□ -0.99
TRIM55-204ENST00000353317 CDK16Q00536 496 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 KLC1Q07866 573 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 MDH1BQ5I0G3 518 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 NOMO2Q5JPE7 1267 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 SNX30Q5VWJ9 437 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 BBS12Q6ZW61 710 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 HACE1Q8IYU2 909 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 PDIK1LQ8N165 341 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 FAM71DQ8N9W8 422 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 ZMIZ2Q8NF64 920 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 TTC17Q96AE7 1141 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 TRIM43Q96BQ3 446 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-204ENST00000353317 MAGEB5Q9BZ81 275 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 KIAA1257Q9ULG3 409 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 TCRBV9S1A1TA0A576 114 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 NT5C1B-RDH14C9J2C7 533 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 M0QZQ0 153 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 CAPN9O14815 690 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 CLGNO14967 610 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 TGDSO95455 350 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 MT-ND3P03897 115 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 KRT3P12035 628 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 BGNP21810 368 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 KDELR1P24390 212 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 VHLP40337 213 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 ELK3P41970 407 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 NEK3P51956 506 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 TAP1Q03518 808 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 CCDC6Q16204 474 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 C15orf59Q2T9L4 293 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-204ENST00000353317 KBTBD12Q3ZCT8 623 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 SYCP2LQ5T4T6 812 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 TMEM154Q6P9G4 183 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 OLFML1Q6UWY5 402 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 GPRIN1Q7Z2K8 1008 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 TMEM110Q86TL2 294 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 ANKRD52Q8NB46 1076 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 UCMAQ8WVF2 138 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 RSPH1Q8WYR4 309 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 PCED1BQ96HM7 432 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 CYTH2Q99418 400 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 PKMYT1Q99640 499 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 MIS12Q9H081 205 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 FAM124BQ9H5Z6 455 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-204ENST00000353317 NRDE2Q9H7Z3 1164 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 TMEM161AQ9NX61 479 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 EFR3BQ9Y2G0 817 aa8.87□□□□□ -0.99
TRIM55-204ENST00000353317 PRG3Q9Y2Y8 225 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-204ENST00000353317 FAM237BA0A1B0GVD1 139 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 OR4Q2P0C623 313 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 MYL2P10916 166 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 PYGBP11216 843 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 SATB1Q01826 763 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 ZBTB16Q05516 673 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 THEMIS2Q5TEJ8 643 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 GLB1LQ6UWU2 654 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 CDHR3Q6ZTQ4 885 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 CLEC20AQ6ZU45 233 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 CYP4V2Q6ZWL3 525 aaPredicted RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 CHSY1Q86X52 802 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 SPDYE1Q8NFV5 336 aaPredicted RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 DTX3LQ8TDB6 740 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 BCL7CQ8WUZ0 217 aaPredicted RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 SCG3Q8WXD2 468 aaKnown RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 APOPT1Q96IL0 206 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 HNRNPABQ99729 332 aaKnown RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 SMOQ99835 787 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 ARMCX1Q9P291 453 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 MTO1Q9Y2Z2 717 aaKnown RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 CHD9Q3L8U1 2897 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 IQANK1A0A1B0GTG1 560 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 AVILO75366 819 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 KRT7P08729 469 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 NEFHP12036 1026 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 LCP1P13796 627 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 RPL34P49207 117 aaKnown RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 ATXN1P54253 815 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms