RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 TDRD10Q5VZ19 366 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 SLC9A4Q6AI14 798 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 DCDC5Q6ZRR9 648 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 IFNLR1Q8IU57 520 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 JOSD2Q8TAC2 188 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 CDKL2Q92772 493 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 CEP170P1Q96L14 293 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 OR52B2Q96RD2 323 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 HNRNPABQ99729 332 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 KCNH7Q9NS40 1196 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 DNAJC28Q9NX36 388 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 PAK5Q9P286 719 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 AP4S1Q9Y587 144 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 CDY2AQ9Y6F7 541 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 CDY1Q9Y6F8 540 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 A0A087WXM4 84 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 C7orf72A4D263 438 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 APOC4-APOC2K7ER74 178 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 PMM2O15305 246 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 TPST1O60507 370 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 GH2P01242 217 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 APOC2P02655 101 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 MAPTP10636 758 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 MYL4P12829 197 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 CPA3P15088 417 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 SESN2P58004 480 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 GNA12Q03113 381 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 NME3Q13232 169 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 PTK2BQ14289 1009 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 DOK7Q18PE1 504 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 CDC42EP5Q6NZY7 148 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 ELMSAN1Q6PJG2 1045 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 LAYNQ6UX15 382 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 SETD3Q86TU7 594 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 THNSL1Q8IYQ7 743 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 MPP5Q8N3R9 675 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 TDRD5Q8NAT2 981 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 LINC00116Q8NCU8 138 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 TMEM161BQ8NDZ6 487 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 MOCOSQ96EN8 888 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 MFSD14AQ96MC6 490 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 NPAS2Q99743 824 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 STN1Q9H668 368 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 NOL11Q9H8H0 719 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 CXorf21Q9HAI6 301 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 APOBEC3GQ9HC16 384 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 NYAP2Q9P242 653 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 PPP1R1BQ9UD71 204 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 DAPK2Q9UIK4 370 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 PRPF19Q9UMS4 504 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 NUB1Q9Y5A7 615 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 SQORQ9Y6N5 450 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 RNF103-CHMP3A0A140T963 221 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 RGSL1A5PLK6 1076 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 CFAP99D6REC4 459 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 H3BNH8 94 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 TRDMT1O14717 391 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 PLIN3O60664 434 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 LRCH4O75427 683 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 ESRRBO95718 433 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF12P17014 697 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 CKMT2P17540 419 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 ATP2B4P23634 1241 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 RBL1P28749 1068 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 POLR2BP30876 1174 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 CDK18Q07002 472 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 CD300CQ08708 224 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 CEACAM7Q14002 265 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF829Q3KNS6 432 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 PERM1Q5SV97 790 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 LDLRAP1Q5SW96 308 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 THOC7Q6I9Y2 204 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 SLC2A7Q6PXP3 512 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 HOMEZQ8IX15 550 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 ALDH16A1Q8IZ83 802 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 SIX6OS1Q8N1H7 587 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 CYGBQ8WWM9 190 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 OSBPL11Q9BXB4 747 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 PCDHAC1Q9H158 963 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 POPDC2Q9HBU9 364 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 SLC38A7Q9NVC3 462 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 TMEM216Q9P0N5 145 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 SMCHD1A6NHR9 2005 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 LDHAP00338 332 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 TFE3P19532 575 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 TM4SF1P30408 202 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 CYP2A13Q16696 494 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 TMEM26Q6ZUK4 368 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 KBTBD7Q8WVZ9 684 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 KLHL32Q96NJ5 620 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 POLR1BQ9H9Y6 1135 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 EFCAB1Q9HAE3 211 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 VPS45Q9NRW7 570 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 RBAKQ9NYW8 714 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 AURKCQ9UQB9 309 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 ZNFX1Q9P2E3 1918 aaKnown RBP7.82□□□□□ -1.16
BRCA1-201ENST00000352993 GAKO14976 1311 aa7.82□□□□□ -1.16
BRCA1-201ENST00000352993 LAMB2P55268 1798 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms