RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 RNF112Q9ULX5 631 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 ARL2BPQ9Y2Y0 163 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 A0A1W2PQH9 124 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 TMEM247A6NEH6 219 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 SNAI1O95863 264 aaPredicted RBP14.04□□□□□ -0.16
SMC6-201ENST00000351948 CSH1P0DML2 217 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 CSH2P0DML3 217 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 HSPA8P11142 646 aaKnown RBP14.04□□□□□ -0.16
SMC6-201ENST00000351948 TCN1P20061 433 aaPredicted RBP14.04□□□□□ -0.16
SMC6-201ENST00000351948 SLC8A1P32418 973 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 TMEM259Q4ZIN3 620 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 HGSNATQ68CP4 663 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 RGS9BPQ6ZS82 235 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 CCDC149Q6ZUS6 474 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 KCNK16Q96T55 309 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 CENPKQ9BS16 269 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 NRDE2Q9H7Z3 1164 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 CRYBG1Q9Y4K1 1723 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 VPS26AO75436 327 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 MATKP42679 507 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 RAD23BP54727 409 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 TBCCQ15814 346 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 FNDC3BQ53EP0 1204 aaKnown RBP14.04□□□□□ -0.16
SMC6-201ENST00000351948 LRRC8EQ6NSJ5 796 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 SLC26A11Q86WA9 606 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 OR52K1Q8NGK4 314 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 HTATIP2Q9BUP3 242 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 ZDHHC6Q9H6R6 413 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 THG1LQ9NWX6 298 aaKnown RBP14.04□□□□□ -0.16
SMC6-201ENST00000351948 PCDHGB4Q9UN71 923 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 C10orf71Q711Q0 1435 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 RPTORQ8N122 1335 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 AIM2O14862 343 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 CCDC22O60826 627 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 TBL1XO60907 577 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 IRAK1P51617 712 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 GRB14Q14449 540 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 PRSS55Q6UWB4 352 aaPredicted RBP14.04□□□□□ -0.16
SMC6-201ENST00000351948 RNF157Q96PX1 679 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 FZD8Q9H461 694 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 ST6GALNAC4Q9H4F1 302 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 SPG21Q9NZD8 308 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 XPO1O14980 1071 aaKnown RBP14.04□□□□□ -0.16
SMC6-201ENST00000351948 FGBP02675 491 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 CD86P42081 329 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 NDUFV1P49821 464 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 ACAP1Q15027 740 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 OR6K2Q8NGY2 324 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 SNX27Q96L92 541 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 Q9H521 79 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 SLC28A3Q9HAS3 691 aa14.04□□□□□ -0.16
SMC6-201ENST00000351948 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMC6-201ENST00000351948 USP15Q9Y4E8 981 aaPredicted RBP14.04□□□□□ -0.16
SMC6-201ENST00000351948 AGRPO00253 132 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 GLUD2P49448 558 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 LRRC34Q8IZ02 419 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 FCRL2Q96LA5 508 aaPredicted RBP14.03□□□□□ -0.16
SMC6-201ENST00000351948 TBC1D13Q9NVG8 400 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 GMIPQ9P107 970 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 ADAM28Q9UKQ2 775 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 TRAV19A0A0A6YYK7 116 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 LOC102724159A0A0B4J2E5 919 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 H2AFXP16104 143 aaPredicted RBP14.03□□□□□ -0.16
SMC6-201ENST00000351948 MMP8P22894 467 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 NR2C2P49116 596 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 NME5P56597 212 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 PWP2Q15269 919 aaKnown RBP14.03□□□□□ -0.16
SMC6-201ENST00000351948 PRELID2Q8N945 189 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 SLC26A7Q8TE54 656 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 VCX3AQ9NNX9 186 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 CRYL1Q9Y2S2 319 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 PTCH2Q9Y6C5 1203 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 MOXD2PA6NHM9 499 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 ANGPT2O15123 496 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 RIPK2O43353 540 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 PLA2G4AP47712 749 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 ARL4DP49703 201 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 ANKRD20A2Q5SQ80 823 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 ANKRD20A1Q5TYW2 823 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 AGAP9Q5VTM2 703 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 CES5AQ6NT32 575 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
SMC6-201ENST00000351948 PHF21BQ96EK2 531 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 PCED1BQ96HM7 432 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 KLHL5Q96PQ7 755 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 NAT9Q9BTE0 207 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 BRD8Q9H0E9 1235 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.03□□□□□ -0.16
SMC6-201ENST00000351948 ZMYM2Q9UBW7 1377 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 RBAK-RBAKDNI3L0D1 243 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 GUCA1CO95843 209 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 HNRNPH3P31942 346 aaKnown RBP14.03□□□□□ -0.16
SMC6-201ENST00000351948 MGAT5Q09328 741 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 GLT6D1Q7Z4J2 308 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 SAPCD2Q86UD0 394 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 KIF2BQ8N4N8 673 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 LZTR1Q8N653 840 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 NINJ2Q9NZG7 142 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 HMGXB4Q9UGU5 601 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 AJAP1Q9UKB5 411 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms