RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TSPAN14Q8NG11 270 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 RSPH1Q8WYR4 309 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 NIFKQ9BYG3 293 aaKnown RBP19.16■□□□□ 0.66
SCARF1-202ENST00000348987 STN1Q9H668 368 aaKnown RBP19.16■□□□□ 0.66
SCARF1-202ENST00000348987 RAB6BQ9NRW1 208 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 CALB1P05937 261 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 PSMA2P25787 234 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 CDK9P50750 372 aaKnown RBP19.15■□□□□ 0.66
SCARF1-202ENST00000348987 SLC25A11Q02978 314 aaKnown RBP19.15■□□□□ 0.66
SCARF1-202ENST00000348987 GSTM4Q03013 218 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 PTPN20Q4JDL3 420 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 PPP6R3Q5H9R7 873 aaPredicted RBP19.15■□□□□ 0.66
SCARF1-202ENST00000348987 DENND1BQ6P3S1 775 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 DARS2Q6PI48 645 aaKnown RBP19.15■□□□□ 0.66
SCARF1-202ENST00000348987 PPP4R1Q8TF05 950 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 RMI1Q9H9A7 625 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 AS3MTQ9HBK9 375 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 POPDC2Q9HBU9 364 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 ZNF112Q9UJU3 913 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 KANSL1LA0AUZ9 987 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 FZD9O00144 591 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 AIM2O14862 343 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 ZBTB14O43829 449 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 FARP2O94887 1054 aaPredicted RBP19.15■□□□□ 0.66
SCARF1-202ENST00000348987 PRKCHP24723 683 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 ACAT1P24752 427 aaKnown RBP19.15■□□□□ 0.66
SCARF1-202ENST00000348987 RPS12P25398 132 aaKnown RBP19.15■□□□□ 0.66
SCARF1-202ENST00000348987 ARRB2P32121 409 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 PSMD7P51665 324 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 TAF5Q15542 800 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 TMEM35BQ8NCS4 154 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 PKP2Q99959 881 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 PLGRKTQ9HBL7 147 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 NXF1Q9UBU9 619 aaKnown RBP19.15■□□□□ 0.66
SCARF1-202ENST00000348987 STK39Q9UEW8 545 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 PCSK1NQ9UHG2 260 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 EFR3BQ9Y2G0 817 aa19.15■□□□□ 0.66
SCARF1-202ENST00000348987 IGKV6D-21A0A0A0MT36 114 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 LRCH4O75427 683 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 OXCT1P55809 520 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 CREB5Q02930 508 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 FLOT2Q14254 428 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 ADRM1Q16186 407 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 TREML2Q5T2D2 321 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 GRAMD4Q6IC98 578 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 ELMSAN1Q6PJG2 1045 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 THNSL1Q8IYQ7 743 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 ADCY4Q8NFM4 1077 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 HSPH1Q92598 858 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 FRMD8P1Q9BZ68 369 aaPredicted RBP19.14■□□□□ 0.65
SCARF1-202ENST00000348987 NIF3L1Q9GZT8 377 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 DOLKQ9UPQ8 538 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 PHIPQ8WWQ0 1821 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 ADCY6O43306 1168 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 KLHL41O60662 606 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 STAT5BP51692 787 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 CDH8P55286 799 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 KCTD21Q4G0X4 260 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 DCAF15Q66K64 600 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 WDR49Q8IV35 697 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 RNF148Q8N7C7 305 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 KLRG1Q96E93 195 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 C12orf42Q96LP6 360 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 SORT1Q99523 831 aa19.14■□□□□ 0.65
SCARF1-202ENST00000348987 APOC4-APOC2K7ER74 178 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 ZNF195O14628 629 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 FOXD2O60548 495 aaPredicted RBP19.13■□□□□ 0.65
SCARF1-202ENST00000348987 STAM2O75886 525 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 APOEP02649 317 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 APOC2P02655 101 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 COL6A2P12110 1019 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 ZNF23P17027 643 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 PSMC3P17980 439 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 ASPAP45381 313 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 N4BP2L1Q5TBK1 243 aaPredicted RBP19.13■□□□□ 0.65
SCARF1-202ENST00000348987 ITPRIPL1Q6GPH6 555 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 RNF149Q8NC42 400 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 KCTD6Q8NC69 237 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 CATSPER1Q8NEC5 780 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 KBTBD7Q8WVZ9 684 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 LENG8Q96PV6 779 aaPredicted RBP19.13■□□□□ 0.65
SCARF1-202ENST00000348987 CALN1Q9BXU9 219 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 SLC2A11Q9BYW1 496 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 OSBPL6Q9BZF3 934 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 XYLT2Q9H1B5 865 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 TMEM134Q9H6X4 195 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 DNAJC28Q9NX36 388 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 EMCNQ9ULC0 261 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 PADI4Q9UM07 663 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 LCTP09848 1927 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 TRDMT1O14717 391 aaKnown RBP19.13■□□□□ 0.65
SCARF1-202ENST00000348987 CPA3P15088 417 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 CD19P15391 556 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 XRCC1P18887 633 aaPredicted RBP19.13■□□□□ 0.65
SCARF1-202ENST00000348987 TCF7P36402 384 aaPredicted RBP19.13■□□□□ 0.65
SCARF1-202ENST00000348987 GABRB2P47870 512 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 NUDT2P50583 147 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 THOP1P52888 689 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 NRF1Q16656 503 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 LY6KQ17RY6 165 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms