RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 UPP1Q16831 310 aa21.96■■□□□ 1.11
PTPN18-202ENST00000347849 DARS2Q6PI48 645 aaKnown RBP21.96■■□□□ 1.11
PTPN18-202ENST00000347849 GPRIN1Q7Z2K8 1008 aa21.96■■□□□ 1.11
PTPN18-202ENST00000347849 FAM131BQ86XD5 332 aa21.96■■□□□ 1.11
PTPN18-202ENST00000347849 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.96■■□□□ 1.11
PTPN18-202ENST00000347849 ADAM2Q99965 735 aa21.96■■□□□ 1.11
PTPN18-202ENST00000347849 GPBP1L1Q9HC44 474 aaPredicted RBP21.96■■□□□ 1.11
PTPN18-202ENST00000347849 KRT82Q9NSB4 513 aa21.96■■□□□ 1.11
PTPN18-202ENST00000347849 ARMCX1Q9P291 453 aa21.96■■□□□ 1.11
PTPN18-202ENST00000347849 SYNJ2BP-COX16A0A087WUM0 186 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 NDC80O14777 642 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 ALDH1A1P00352 501 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 DLDP09622 509 aaKnown RBP21.95■■□□□ 1.1
PTPN18-202ENST00000347849 SYPL2Q5VXT5 272 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 MRPL10Q7Z7H8 261 aaKnown RBP21.95■■□□□ 1.1
PTPN18-202ENST00000347849 PCED1BQ96HM7 432 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 SERAC1Q96JX3 654 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 USP29Q9HBJ7 922 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.95■■□□□ 1.12e-7■■□□□ 14.3
PTPN18-202ENST00000347849 COX16Q9P0S2 106 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 INPP5FQ9Y2H2 1132 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 GIT1Q9Y2X7 761 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 ASB3Q9Y575 518 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 NRP1O14786 923 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 MDM4O15151 490 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 MYL2P10916 166 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 BRCC3P46736 316 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 CPA2P48052 419 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 DSC3Q14574 896 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 PDK2Q15119 407 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 TRIM71Q2Q1W2 868 aaKnown RBP21.95■■□□□ 1.1
PTPN18-202ENST00000347849 DCAF6Q58WW2 860 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 NETO2Q8NC67 525 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 ZMIZ2Q8NF64 920 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 FRMD8P1Q9BZ68 369 aaPredicted RBP21.95■■□□□ 1.1
PTPN18-202ENST00000347849 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.95■■□□□ 1.1
PTPN18-202ENST00000347849 CHMP2BQ9UQN3 213 aa21.95■■□□□ 1.1
PTPN18-202ENST00000347849 FAM237BA0A1B0GVD1 139 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 H7C0C1 242 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 DNAJC6O75061 913 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 ACADSBP45954 432 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 ATP5OP48047 213 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 SNX16P57768 344 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 OCRLQ01968 901 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 ROR1Q01973 937 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 SLC10A2Q12908 348 aaPredicted RBP21.94■■□□□ 1.1
PTPN18-202ENST00000347849 THOC5Q13769 683 aaKnown RBP21.94■■□□□ 1.1
PTPN18-202ENST00000347849 PRKD1Q15139 912 aaPredicted RBP21.94■■□□□ 1.1
PTPN18-202ENST00000347849 OR52E8Q6IFG1 317 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 CD300LGQ6UXG3 332 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 MAP7D3Q8IWC1 876 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 PDIK1LQ8N165 341 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 PDCD7Q8N8D1 485 aaKnown RBP21.94■■□□□ 1.1
PTPN18-202ENST00000347849 CD99L2Q8TCZ2 262 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 HHIPL1Q96JK4 782 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 KCTD15Q96SI1 283 aaPredicted RBP21.94■■□□□ 1.1
PTPN18-202ENST00000347849 SMOQ99835 787 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 RTP3Q9BQQ7 232 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 XPO7Q9UIA9 1087 aaKnown RBP21.94■■□□□ 1.1
PTPN18-202ENST00000347849 SCOCQ9UIL1 159 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 NR2E3Q9Y5X4 410 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 ITGB1P05556 798 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 CYP2F1P24903 491 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 BCAR1P56945 870 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 GBE1Q04446 702 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 TFDP2Q14188 446 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 AP1ARQ63HQ0 302 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 SLC9A4Q6AI14 798 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 IGDCC3Q8IVU1 814 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 ETNK2Q9NVF9 386 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 AP4E1Q9UPM8 1137 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 IKBKGQ9Y6K9 419 aa21.94■■□□□ 1.1
PTPN18-202ENST00000347849 APOL1O14791 398 aa21.93■■□□□ 1.1
PTPN18-202ENST00000347849 PYGBP11216 843 aa21.93■■□□□ 1.1
PTPN18-202ENST00000347849 RBL1P28749 1068 aa21.93■■□□□ 1.1
PTPN18-202ENST00000347849 MATKP42679 507 aa21.93■■□□□ 1.1
PTPN18-202ENST00000347849 MRPS5P82675 430 aaKnown RBP21.93■■□□□ 1.1
PTPN18-202ENST00000347849 PTK7Q13308 1070 aa21.93■■□□□ 1.1
PTPN18-202ENST00000347849 PPFIBP2Q8ND30 876 aa21.93■■□□□ 1.1
PTPN18-202ENST00000347849 SMC1BQ8NDV3 1235 aa21.93■■□□□ 1.1
PTPN18-202ENST00000347849 PHC3Q8NDX5 983 aa21.93■■□□□ 1.1
PTPN18-202ENST00000347849 OXNAD1Q96HP4 312 aaPredicted RBP21.93■■□□□ 1.1
PTPN18-202ENST00000347849 STX18Q9P2W9 335 aaKnown RBP21.93■■□□□ 1.1
PTPN18-202ENST00000347849 A0A0U1RQF3 1178 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 FCHO1O14526 889 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 TRPA1O75762 1119 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 B3GAT3O94766 335 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 PGM1P36871 562 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 ETV4P43268 484 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 ERFP50548 548 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 TKTL1P51854 596 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 ACLYP53396 1101 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 BASP1P80723 227 aaKnown RBP21.92■■□□□ 1.1
PTPN18-202ENST00000347849 FAAP100Q0VG06 881 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 NOGQ13253 232 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 BIRC2Q13490 618 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 HACE1Q8IYU2 909 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 CYTH2Q99418 400 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 TRPV6Q9H1D0 765 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 NRDE2Q9H7Z3 1164 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms