RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 MCCC1Q96RQ3 725 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-202ENST00000347401 GPN1Q9HCN4 374 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-202ENST00000347401 EPB41L4AQ9HCS5 686 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-202ENST00000347401 CYLDQ9NQC7 956 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 NAALADL1Q9UQQ1 740 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 GLP2RO95838 553 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 NEDD8Q15843 81 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 OR56A4Q8NGH8 313 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 TBX20Q9UMR3 447 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 BTNL10A8MVZ5 291 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 FCHO1O14526 889 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 STOX1Q6ZVD7 989 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 CXXC5Q7LFL8 322 aaKnown RBP13.59□□□□□ -0.23
COL6A3-202ENST00000347401 SLFN11Q7Z7L1 901 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 PACS2Q86VP3 889 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 OXER1Q8TDS5 423 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 ZNF75CPQ92670 426 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-202ENST00000347401 KCTD10Q9H3F6 313 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 ANKZF1Q9H8Y5 726 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 CHP2O43745 196 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 STK4Q13043 487 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 SQLEQ14534 574 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 SMCO1Q147U7 214 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 ERMARDQ5T6L9 678 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 IZUMO1Q8IYV9 350 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 LZTR1Q8N653 840 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 SH3RF3Q8TEJ3 882 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-202ENST00000347401 QRFPRQ96P65 431 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 EHD3Q9NZN3 535 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 CARD8Q9Y2G2 431 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 RRN3P2A6NIE6 340 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 EPN2O95208 641 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 MAPK9P45984 424 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 HECTD3Q5T447 861 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 NT5DC4Q86YG4 428 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 IL22Q9GZX6 179 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 JMJD4Q9H9V9 463 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 ST3GAL5Q9UNP4 418 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 A0A088AWK7 358 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 BNIP3LO60238 219 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 KCNH1O95259 989 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 CYP11B1P15538 503 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 ZNF10P21506 573 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-202ENST00000347401 CDH17Q12864 832 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 SLC44A2Q8IWA5 706 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-202ENST00000347401 FAM126BQ8IXS8 530 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 FAM49AQ9H0Q0 323 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-202ENST00000347401 CHORDC1Q9UHD1 332 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-202ENST00000347401 RGS14O43566 566 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 NPY2RP49146 381 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 HSF2Q03933 536 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 CDKAL1Q5VV42 579 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 ANKRD13AQ8IZ07 590 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 TRPV1Q8NER1 839 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 ACOT12Q8WYK0 555 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 WDCPQ9H6R7 721 aa13.59□□□□□ -0.23
COL6A3-202ENST00000347401 GSG1L2A8MUP6 293 aa13.58□□□□□ -0.23
COL6A3-202ENST00000347401 ODC1P11926 461 aa13.58□□□□□ -0.23
COL6A3-202ENST00000347401 PPIL2Q13356 520 aa13.58□□□□□ -0.23
COL6A3-202ENST00000347401 KBTBD4Q9NVX7 518 aa13.58□□□□□ -0.23
COL6A3-202ENST00000347401 MAP2K7O14733 419 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 CHADO15335 359 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 PROSER1Q86XN7 944 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 PCYOX1Q9UHG3 505 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 OVOS2A0A0J9YW53 1432 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 OVOS2Q6IE36 1432 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 GNG14A0A1W2PPG7 69 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 SMIM22K7EJ46 135 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 DARSP14868 501 aaKnown RBP13.58□□□□□ -0.24
COL6A3-202ENST00000347401 ETS1P14921 441 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 ZRANB3Q5FWF4 1079 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 RPRD1AQ96P16 312 aaPredicted RBP13.58□□□□□ -0.24
COL6A3-202ENST00000347401 MYMKA6NI61 221 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 TPST1O60507 370 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 Q3C1V9 767 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 RNF146Q9NTX7 359 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 TBC1D30Q9Y2I9 924 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 F5H6K3 240 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 ZW10O43264 779 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 REM1O75628 298 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 LRPAP1P30533 357 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 ARPP19P56211 112 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 KLRC3Q07444 240 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 DYNLL2Q96FJ2 89 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 COPS7BQ9H9Q2 264 aaPredicted RBP13.58□□□□□ -0.24
COL6A3-202ENST00000347401 DYRK1BQ9Y463 629 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 MAGI3Q5TCQ9 1506 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 SEMA3DO95025 777 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 HPGDP15428 266 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 GPC1P35052 558 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 SLC11A2P49281 568 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 PLIN5Q00G26 463 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 NR6A1Q15406 480 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 ZFP69Q49AA0 526 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 FBXO25Q8TCJ0 367 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 UTP15Q8TED0 518 aaKnown RBP13.58□□□□□ -0.24
COL6A3-202ENST00000347401 DSN1Q9H410 356 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 TAS2R13Q9NYV9 303 aa13.58□□□□□ -0.24
COL6A3-202ENST00000347401 BBIP1A8MTZ0 92 aa13.57□□□□□ -0.24
COL6A3-202ENST00000347401 HLA-DRAP01903 254 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms