RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 PRDM12Q9H4Q4 367 aa26.01■■□□□ 1.75
TRADD-201ENST00000345057 CNOT10Q9H9A5 744 aaKnown RBP26.01■■□□□ 1.75
TRADD-201ENST00000345057 TCRBV7S3A2A0A539 114 aa26■■□□□ 1.75
TRADD-201ENST00000345057 SMIM23A6NLE4 172 aa26■■□□□ 1.75
TRADD-201ENST00000345057 CDH16O75309 829 aa26■■□□□ 1.75
TRADD-201ENST00000345057 PAGE1O75459 146 aa26■■□□□ 1.75
TRADD-201ENST00000345057 PPP2R2AP63151 447 aa26■■□□□ 1.75
TRADD-201ENST00000345057 COG7P83436 770 aa26■■□□□ 1.75
TRADD-201ENST00000345057 CDK16Q00536 496 aa26■■□□□ 1.75
TRADD-201ENST00000345057 ZNF33AQ06730 810 aa26■■□□□ 1.75
TRADD-201ENST00000345057 AUHQ13825 339 aaKnown RBP26■■□□□ 1.75
TRADD-201ENST00000345057 DNAJC21Q5F1R6 531 aaKnown RBP26■■□□□ 1.75
TRADD-201ENST00000345057 ANKRD20A2Q5SQ80 823 aa26■■□□□ 1.75
TRADD-201ENST00000345057 ANKRD20A1Q5TYW2 823 aa26■■□□□ 1.75
TRADD-201ENST00000345057 ANKRD20A3Q5VUR7 823 aa26■■□□□ 1.75
TRADD-201ENST00000345057 TAB3Q8N5C8 712 aaPredicted RBP26■■□□□ 1.75
TRADD-201ENST00000345057 P2RY11Q96G91 374 aa26■■□□□ 1.75
TRADD-201ENST00000345057 C1orf74Q96LT6 269 aa26■■□□□ 1.75
TRADD-201ENST00000345057 VPS37BQ9H9H4 285 aa26■■□□□ 1.75
TRADD-201ENST00000345057 ETNK1Q9HBU6 452 aa26■■□□□ 1.75
TRADD-201ENST00000345057 LRRC4CQ9HCJ2 640 aa26■■□□□ 1.75
TRADD-201ENST00000345057 STK39Q9UEW8 545 aa26■■□□□ 1.75
TRADD-201ENST00000345057 SLC12A6Q9UHW9 1150 aa26■■□□□ 1.75
TRADD-201ENST00000345057 KCNU1A8MYU2 1149 aa26■■□□□ 1.75
TRADD-201ENST00000345057 SHOX2O60902 331 aaPredicted RBP26■■□□□ 1.75
TRADD-201ENST00000345057 SPAG6O75602 509 aa26■■□□□ 1.75
TRADD-201ENST00000345057 VAV1P15498 845 aa26■■□□□ 1.75
TRADD-201ENST00000345057 HOXC13P31276 330 aa26■■□□□ 1.75
TRADD-201ENST00000345057 HPDP32754 393 aaPredicted RBP26■■□□□ 1.75
TRADD-201ENST00000345057 SEMA5AQ13591 1074 aa26■■□□□ 1.75
TRADD-201ENST00000345057 BTG3Q14201 252 aaPredicted RBP26■■□□□ 1.75
TRADD-201ENST00000345057 LONRF1Q17RB8 773 aa26■■□□□ 1.75
TRADD-201ENST00000345057 CCDC38Q502W7 563 aa26■■□□□ 1.75
TRADD-201ENST00000345057 FNBP1LQ5T0N5 605 aa26■■□□□ 1.75
TRADD-201ENST00000345057 HDAC11Q96DB2 347 aa26■■□□□ 1.75
TRADD-201ENST00000345057 TBC1D31Q96DN5 1066 aa26■■□□□ 1.75
TRADD-201ENST00000345057 OSER1Q9NX31 292 aa26■■□□□ 1.75
TRADD-201ENST00000345057 DONSONQ9NYP3 566 aa26■■□□□ 1.75
TRADD-201ENST00000345057 ZMYND8Q9ULU4 1186 aaPredicted RBP26■■□□□ 1.75
TRADD-201ENST00000345057 DYNC1LI1Q9Y6G9 523 aaKnown RBP26■■□□□ 1.75
TRADD-201ENST00000345057 WDR27A2RRH5 827 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 VNN2O95498 520 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 APOEP02649 317 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 APRTP07741 180 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 CSF2RAP15509 400 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 WDR5P61964 334 aaKnown RBP25.99■■□□□ 1.75
TRADD-201ENST00000345057 PPIDQ08752 370 aaKnown RBP25.99■■□□□ 1.75
TRADD-201ENST00000345057 TNFAIP8L3Q5GJ75 292 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 TPGS2Q68CL5 300 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 TADA2BQ86TJ2 420 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 PALM2Q8IXS6 379 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 SLC39A11Q8N1S5 342 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 LRRC39Q96DD0 335 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 SLC39A13Q96H72 371 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 HERC2P3Q9BVR0 1158 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 TTLL2Q9BWV7 592 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 RC3H2Q9HBD1 1191 aaKnown RBP25.99■■□□□ 1.75
TRADD-201ENST00000345057 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.99■■□□□ 1.75
TRADD-201ENST00000345057 FETUBQ9UGM5 382 aa25.99■■□□□ 1.75
TRADD-201ENST00000345057 AFF4Q9UHB7 1163 aaKnown RBP25.99■■□□□ 1.75
TRADD-201ENST00000345057 RNF103O00237 685 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 MSI1O43347 362 aaKnown RBP25.98■■□□□ 1.75
TRADD-201ENST00000345057 OR1D2P34982 312 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 SLCO1A2P46721 670 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 PGFP49763 221 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 KPNA1P52294 538 aaPredicted RBP25.98■■□□□ 1.75
TRADD-201ENST00000345057 TBX4P57082 545 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 GALNT2Q10471 571 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 TAF10Q12962 218 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 FASTKD3Q14CZ7 662 aaKnown RBP25.98■■□□□ 1.75
TRADD-201ENST00000345057 BBS9Q3SYG4 887 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 GLIPR1L2Q4G1C9 344 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 PDZD8Q8NEN9 1154 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 OVCA2Q8WZ82 227 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 VAT1Q99536 393 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 SIK2Q9H0K1 926 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 CRISPLD1Q9H336 500 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 XAB2Q9HCS7 855 aaKnown RBP25.98■■□□□ 1.75
TRADD-201ENST00000345057 EXOC1LA0A1B0GW35 172 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 TRIM43BA6NCK2 446 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 DSG1Q02413 1049 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 SKIDA1Q1XH10 827 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 RWDD4Q6NW29 188 aaKnown RBP25.98■■□□□ 1.75
TRADD-201ENST00000345057 CCDC13Q8IYE1 715 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 FBXO36Q8NEA4 188 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 TRIM43Q96BQ3 446 aaPredicted RBP25.98■■□□□ 1.75
TRADD-201ENST00000345057 FCRL2Q96LA5 508 aaPredicted RBP25.98■■□□□ 1.75
TRADD-201ENST00000345057 EIF2B3Q9NR50 452 aaKnown RBP25.98■■□□□ 1.75
TRADD-201ENST00000345057 SPG21Q9NZD8 308 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 FNIP2Q9P278 1114 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 LGALS13Q9UHV8 139 aa25.98■■□□□ 1.75
TRADD-201ENST00000345057 COL4A6Q14031 1691 aa25.97■■□□□ 1.75
TRADD-201ENST00000345057 SLC38A8A6NNN8 435 aa25.97■■□□□ 1.75
TRADD-201ENST00000345057 SRGAP2BP0DMP2 458 aa25.97■■□□□ 1.75
TRADD-201ENST00000345057 ATP1A2P50993 1020 aa25.97■■□□□ 1.75
TRADD-201ENST00000345057 TRIP4Q15650 581 aaPredicted RBP25.97■■□□□ 1.75
TRADD-201ENST00000345057 PARP6Q2NL67 630 aa25.97■■□□□ 1.75
TRADD-201ENST00000345057 MANEALQ5VSG8 457 aa25.97■■□□□ 1.75
TRADD-201ENST00000345057 TDRPQ86YL5 185 aa25.97■■□□□ 1.75
TRADD-201ENST00000345057 ZNF276Q8N554 614 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms