RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 CCR2P41597 374 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 HCAR3P49019 387 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 TUBP50607 506 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 KPNA1P52294 538 aaPredicted RBP13.1□□□□□ -0.31
CT55-202ENST00000344129 GDF10P55107 478 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 MLLT6P55198 1093 aaPredicted RBP13.1□□□□□ -0.31
CT55-202ENST00000344129 NTHL1P78549 312 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 ARTNQ5T4W7 220 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 KLHDC10Q6PID8 442 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 CCNI2Q6ZMN8 369 aaPredicted RBP13.1□□□□□ -0.31
CT55-202ENST00000344129 UNC45BQ8IWX7 931 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 ALLCQ8N6M5 410 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 C12orf76Q8N812 135 aaPredicted RBP13.1□□□□□ -0.31
CT55-202ENST00000344129 MAB21L3Q8N8X9 362 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 MRPS31Q92665 395 aaKnown RBP13.1□□□□□ -0.31
CT55-202ENST00000344129 SLCO2A1Q92959 643 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 TBC1D31Q96DN5 1066 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 TCEAL4Q96EI5 215 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 BTN2A3PQ96KV6 586 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 GCNAQ96QF7 691 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 KLF16Q9BXK1 252 aaPredicted RBP13.1□□□□□ -0.31
CT55-202ENST00000344129 FRMD8P1Q9BZ68 369 aaPredicted RBP13.1□□□□□ -0.31
CT55-202ENST00000344129 DTLQ9NZJ0 730 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 DNMT3BQ9UBC3 853 aaKnown RBP13.1□□□□□ -0.31
CT55-202ENST00000344129 ASIC3Q9UHC3 531 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 VANGL2Q9ULK5 521 aa13.1□□□□□ -0.31
CT55-202ENST00000344129 DRG1Q9Y295 367 aaKnown RBP13.1□□□□□ -0.31
CT55-202ENST00000344129 TRANK1O15050 2925 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 BHMG1C9JSJ3 638 aaPredicted RBP13.09□□□□□ -0.31
CT55-202ENST00000344129 GAS8O95995 478 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 IFNB1P01574 187 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 KRT14P02533 472 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 ITGAVP06756 1048 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 H2AFXP16104 143 aaPredicted RBP13.09□□□□□ -0.31
CT55-202ENST00000344129 IRAK1P51617 712 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 NRLP54845 237 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 RING1Q06587 406 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 AUHQ13825 339 aaKnown RBP13.09□□□□□ -0.31
CT55-202ENST00000344129 PTK6Q13882 451 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 MANEALQ5VSG8 457 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 NUGGCQ68CJ6 796 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 DUPD1Q68J44 220 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 NADSYN1Q6IA69 706 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 TMCO3Q6UWJ1 677 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 DENND1CQ8IV53 801 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 NPWQ8N729 165 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 FAM71DQ8N9W8 422 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 RAB17Q9H0T7 212 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 IGFLR1Q9H665 355 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 MPP6Q9NZW5 540 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 FEZ2Q9UHY8 353 aaPredicted RBP13.09□□□□□ -0.31
CT55-202ENST00000344129 NFU1Q9UMS0 254 aa13.09□□□□□ -0.31
CT55-202ENST00000344129 CCDC195A0A1B0GUA6 201 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 STC2O76061 302 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 SEC31AO94979 1220 aaKnown RBP13.08□□□□□ -0.32
CT55-202ENST00000344129 KLKB1P03952 638 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 PTPN2P17706 415 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 HDCP19113 662 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 RBL1P28749 1068 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 CDC25CP30307 473 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 CORO1AP31146 461 aaKnown RBP13.08□□□□□ -0.32
CT55-202ENST00000344129 RPL21P46778 160 aaKnown RBP13.08□□□□□ -0.32
CT55-202ENST00000344129 HARS2P49590 506 aaKnown RBP13.08□□□□□ -0.32
CT55-202ENST00000344129 CLCN6P51797 869 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 COG7P83436 770 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 LMNB2Q03252 620 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 PAFAH1B3Q15102 231 aaKnown RBP13.08□□□□□ -0.32
CT55-202ENST00000344129 DUSP6Q16828 381 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
CT55-202ENST00000344129 CHSY1Q86X52 802 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 CIR1Q86X95 450 aaPredicted RBP13.08□□□□□ -0.32
CT55-202ENST00000344129 VN1R2Q8NFZ6 395 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 SHKBP1Q8TBC3 707 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 RSAD2Q8WXG1 361 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 IGSF8Q969P0 613 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 PLD4Q96BZ4 506 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 MYEOVQ96EZ4 313 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 CELF6Q96J87 481 aaKnown RBP13.08□□□□□ -0.32
CT55-202ENST00000344129 C1orf74Q96LT6 269 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 LMAN2LQ9H0V9 348 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 SMG9Q9H0W8 520 aaKnown RBP13.08□□□□□ -0.32
CT55-202ENST00000344129 NEUROG2Q9H2A3 272 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 TMEM51Q9NW97 253 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 NEU2Q9Y3R4 380 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 CPQQ9Y646 472 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 DOCK6Q96HP0 2047 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 TRDMT1O14717 391 aaKnown RBP13.08□□□□□ -0.32
CT55-202ENST00000344129 ACSL4O60488 711 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 XYLBO75191 536 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 CNTN5O94779 1100 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 CKMP06732 381 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 RHOP08100 348 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 TACR2P21452 398 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 MCM3P25205 808 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 NR2C2P49116 596 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 ZNF135P52742 658 aaPredicted RBP13.08□□□□□ -0.32
CT55-202ENST00000344129 ZXDBP98169 803 aa13.08□□□□□ -0.32
CT55-202ENST00000344129 HLTFQ14527 1009 aaKnown RBP eCLIP13.08□□□□□ -0.32
CT55-202ENST00000344129 BRD3Q15059 726 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms