RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 GGA1Q9UJY5 639 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DFFAO00273 331 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PIGRP01833 764 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ITGALP20701 1170 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 STOMP27105 288 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ACADLP28330 430 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 AGAP7PQ5VUJ5 663 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 SV2BQ7L1I2 683 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 C2CD5Q86YS7 1000 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 URGCPQ8TCY9 931 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PURBQ96QR8 312 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 NPLQ9BXD5 320 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 FANCAO15360 1455 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PRDM2Q13029 1718 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 A0A0A6YYH2 397 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 A6NJ64 397 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 HUS1O60921 280 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ADAM11O75078 769 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TGFB3P10600 412 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 L1CAMP32004 1257 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ADAM9Q13443 819 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 UGT2A3Q6UWM9 527 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 FN3KQ9H479 309 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PDGFCQ9NRA1 345 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 RTCBQ9Y3I0 505 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 GNAZP19086 355 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ANXA11P50995 505 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ARHGDIBP52566 201 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 GSTO1P78417 241 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CYP4F22Q6NT55 531 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TSPAN14Q8NG11 270 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DBNDD1Q9H9R9 158 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 HMGXB4Q9UGU5 601 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TO15178 435 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 KRT36O76013 467 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DHFRP00374 187 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 NFICP08651 508 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DRD4P21917 467 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 S100PP25815 95 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MAPK4P31152 587 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 FLI1Q01543 452 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DRAP1Q14919 205 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 VANGL1Q8TAA9 524 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ADAMTS16Q8TE57 1224 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DHX33Q9H6R0 707 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ZSCAN32Q9NX65 697 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF180Q9UJW8 692 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MEI4A8MW99 385 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 G3V2T6 193 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TAC1P20366 129 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 NAE1Q13564 534 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 RHEBQ15382 184 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CDNFQ49AH0 187 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TIGD3Q6B0B8 471 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DCUN1D2Q6PH85 259 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 RRM2BQ7LG56 351 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 FMR1NBQ8N0W7 255 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MFSD9Q8NBP5 474 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 NIPAL2Q9H841 368 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 KCNMB3Q9NPA1 279 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MBIPQ9NS73 344 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 SAGE1Q9NXZ1 904 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TLR7Q9NYK1 1049 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ZMYM2Q9UBW7 1377 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 NR1I2O75469 434 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 FCER2P06734 321 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 CREB3L2Q70SY1 520 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 C7orf31Q8N865 590 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 EPS8L3Q8TE67 593 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 BTBD10Q9BSF8 475 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 MED14O60244 1454 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ITIH2P19823 946 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ADAM17P78536 824 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ARL6IP4Q66PJ3 421 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 MICU3Q86XE3 530 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 SLC15A3Q8IY34 581 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 LRRN4CLQ8ND94 238 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 RORBQ92753 470 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 TLCD1Q96CP7 247 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 EYA1Q99502 592 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 REXO4Q9GZR2 422 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 MYO3BQ8WXR4 1341 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 MROH2BQ7Z745 1585 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 SCO2O43819 266 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 HEXIM1O94992 359 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 H2AFZP0C0S5 128 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 POLR2MP0CAP2 368 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ARL4CP56559 192 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 MYBPC1Q00872 1141 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 TWISTNBQ3B726 338 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 H2AFVQ71UI9 128 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ARPINQ7Z6K5 226 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 FAM124AQ86V42 546 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 FAM20CQ8IXL6 584 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ELMOD1Q8N336 334 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 OR6P1Q8NGX9 317 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 ATG4AQ8WYN0 398 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 MAGEB5Q9BZ81 275 aa3.84□□□□□ -1.79
SYNE2-202ENST00000344113 PRPF19Q9UMS4 504 aaKnown RBP3.84□□□□□ -1.79
SYNE2-202ENST00000344113 AGRPO00253 132 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms