RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 RIBC1Q8N443 379 aaPredicted RBP20.6■□□□□ 0.89
RTN1-202ENST00000342503 MCUQ8NE86 351 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 HAPLN3Q96S86 360 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 SIK2Q9H0K1 926 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 CWH43Q9H720 699 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 SEPT10Q9P0V9 454 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 RABGEF1Q9UJ41 708 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 TEX264Q9Y6I9 313 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 COL4A6Q14031 1691 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 LTBP2Q14767 1821 aa20.59■□□□□ 0.89
RTN1-202ENST00000342503 FOXO6A8MYZ6 492 aa20.59■□□□□ 0.89
RTN1-202ENST00000342503 HAPLN1P10915 354 aaPredicted RBP20.59■□□□□ 0.89
RTN1-202ENST00000342503 TSHRP16473 764 aa20.59■□□□□ 0.89
RTN1-202ENST00000342503 WASHC5Q12768 1159 aa20.59■□□□□ 0.89
RTN1-202ENST00000342503 SEMA5AQ13591 1074 aa20.59■□□□□ 0.89
RTN1-202ENST00000342503 MGAT5BQ3V5L5 792 aa20.59■□□□□ 0.89
RTN1-202ENST00000342503 C3orf62Q6ZUJ4 267 aa20.59■□□□□ 0.89
RTN1-202ENST00000342503 CAND1Q86VP6 1230 aaKnown RBP20.59■□□□□ 0.89
RTN1-202ENST00000342503 AGGF1Q8N302 714 aaeCLIP20.59■□□□□ 0.89
RTN1-202ENST00000342503 COLGALT1Q8NBJ5 622 aa20.59■□□□□ 0.89
RTN1-202ENST00000342503 SEPT5Q99719 369 aaPredicted RBP20.59■□□□□ 0.89
RTN1-202ENST00000342503 FERMT1Q9BQL6 677 aa20.59■□□□□ 0.89
RTN1-202ENST00000342503 CEP41Q9BYV8 373 aa20.59■□□□□ 0.89
RTN1-202ENST00000342503 PAGE1O75459 146 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 EFEMP2O95967 443 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 SRGAP2BP0DMP2 458 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 YWHAQP27348 245 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 FDFT1P37268 417 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 ALDH7A1P49419 539 aaKnown RBP20.58■□□□□ 0.89
RTN1-202ENST00000342503 SMARCB1Q12824 385 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 PPP2R5DQ14738 602 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 TMED2Q15363 201 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 MSANTD2Q6P1R3 559 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 TDRPQ86YL5 185 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 FBF1Q8TES7 1133 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 SERPINB11Q96P15 392 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 OXCT2Q9BYC2 517 aaPredicted RBP20.58■□□□□ 0.89
RTN1-202ENST00000342503 RABEP2Q9H5N1 569 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 NEU3Q9UQ49 428 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 SHROOM3Q8TF72 1996 aa20.58■□□□□ 0.89
RTN1-202ENST00000342503 FAM92AA1XBS5 289 aa20.58■□□□□ 0.88
RTN1-202ENST00000342503 F5H423 210 aaPredicted RBP20.58■□□□□ 0.88
RTN1-202ENST00000342503 RTN3O95197 1032 aaPredicted RBP20.58■□□□□ 0.88
RTN1-202ENST00000342503 CLTBP09497 229 aa20.58■□□□□ 0.88
RTN1-202ENST00000342503 CHN1P15882 459 aa20.58■□□□□ 0.88
RTN1-202ENST00000342503 RWDD4Q6NW29 188 aaKnown RBP20.58■□□□□ 0.88
RTN1-202ENST00000342503 C2orf15Q8WU43 125 aaKnown RBP20.58■□□□□ 0.88
RTN1-202ENST00000342503 FBXO32Q969P5 355 aa20.58■□□□□ 0.88
RTN1-202ENST00000342503 SPATA17Q96L03 361 aa20.58■□□□□ 0.88
RTN1-202ENST00000342503 CDY1Q9Y6F8 540 aa20.58■□□□□ 0.88
RTN1-202ENST00000342503 NUP205Q92621 2012 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 KCNU1A8MYU2 1149 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 NCAM2O15394 837 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 OPHN1O60890 802 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 CREB1P16220 341 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 KCNA4P22459 653 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 SERPINB6P35237 376 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 RFC2P35250 354 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 PPIDQ08752 370 aaKnown RBP20.57■□□□□ 0.88
RTN1-202ENST00000342503 GALNT2Q10471 571 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 DUSP4Q13115 394 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 EFTUD2Q15029 972 aaKnown RBP eCLIP20.57■□□□□ 0.88
RTN1-202ENST00000342503 ZNF534Q76KX8 674 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 ZNF567Q8N184 647 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 FBXO22Q8NEZ5 403 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 MAML1Q92585 1016 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 VN1R3Q9BXE9 311 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 EPN3Q9H201 632 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 SLC24A2Q9UI40 661 aa20.57■□□□□ 0.88
RTN1-202ENST00000342503 MYO18AQ92614 2054 aaKnown RBP20.57■□□□□ 0.88
RTN1-202ENST00000342503 ADAM12O43184 909 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 ATP2A2P16615 1042 aaKnown RBP20.56■□□□□ 0.88
RTN1-202ENST00000342503 MX2P20592 715 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 ZSCAN26Q16670 478 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 USP41Q3LFD5 358 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 TADA2BQ86TJ2 420 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 DEPDC1BQ8WUY9 529 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 CENPTQ96BT3 561 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 HDAC11Q96DB2 347 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 MRRFQ96E11 262 aaKnown RBP20.56■□□□□ 0.88
RTN1-202ENST00000342503 IGSF21Q96ID5 467 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 FCRL2Q96LA5 508 aaPredicted RBP20.56■□□□□ 0.88
RTN1-202ENST00000342503 BRD8Q9H0E9 1235 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 ACSS3Q9H6R3 686 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 PPCSQ9HAB8 311 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 TLR6Q9Y2C9 796 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 KCNK1O00180 336 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 ZNF189O75820 626 aaPredicted RBP20.56■□□□□ 0.88
RTN1-202ENST00000342503 MOCS2O96007 188 aaPredicted RBP20.56■□□□□ 0.88
RTN1-202ENST00000342503 PTPN3P26045 913 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 GEMIN4P57678 1058 aaKnown RBP20.56■□□□□ 0.88
RTN1-202ENST00000342503 TAF10Q12962 218 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 LRRC26Q2I0M4 334 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 KLHL38Q2WGJ6 581 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 ARTNQ5T4W7 220 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 MANEALQ5VSG8 457 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 BCAS4Q8TDM0 211 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 TBC1D31Q96DN5 1066 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 CELF6Q96J87 481 aaKnown RBP20.56■□□□□ 0.88
RTN1-202ENST00000342503 PPANQ9NQ55 473 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms