RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 DEFB106AQ8N104 65 aa20.9■□□□□ 0.94
SYNE2-201ENST00000341472 C1orf131Q8NDD1 294 aaKnown RBP20.9■□□□□ 0.94
SYNE2-201ENST00000341472 CEP76Q8TAP6 659 aa20.9■□□□□ 0.94
SYNE2-201ENST00000341472 ZNF419Q96HQ0 510 aaPredicted RBP20.9■□□□□ 0.94
SYNE2-201ENST00000341472 LSM14BQ9BX40 385 aaKnown RBP20.9■□□□□ 0.94
SYNE2-201ENST00000341472 NUSAP1Q9BXS6 441 aaKnown RBP20.9■□□□□ 0.94
SYNE2-201ENST00000341472 CNOT1A5YKK6 2376 aaKnown RBP20.89■□□□□ 0.94
SYNE2-201ENST00000341472 HSF2BPO75031 334 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 IGLV3-25P01717 112 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 SLC2A3P11169 496 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 HLA-EP13747 358 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 CD6P30203 668 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 OXTRP30559 389 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 LMAN2Q12907 356 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 DAB2IPQ5VWQ8 1189 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 LGI2Q8N0V4 545 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 CFAP52Q8N1V2 620 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 CARNMT1Q8N4J0 409 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 ATP6V0D2Q8N8Y2 350 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 TMEM35BQ8NCS4 154 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 WFDC5Q8TCV5 224 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 RNF34Q969K3 372 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 MYEOVQ96EZ4 313 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 TOE1Q96GM8 510 aaKnown RBP20.89■□□□□ 0.93
SYNE2-201ENST00000341472 BTN2A3PQ96KV6 586 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 SLC2A13Q96QE2 648 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 TMEM245Q9H330 911 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 FAM204AQ9H8W3 233 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 TMEM9BQ9NQ34 198 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 TAB2Q9NYJ8 693 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 SUN2Q9UH99 717 aa20.89■□□□□ 0.93
SYNE2-201ENST00000341472 XPO7Q9UIA9 1087 aaKnown RBP20.89■□□□□ 0.93
SYNE2-201ENST00000341472 GRAP2O75791 330 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 ACADMP11310 421 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 KCNA4P22459 653 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 PITX1P78337 314 aaPredicted RBP20.88■□□□□ 0.93
SYNE2-201ENST00000341472 SLC6A3Q01959 620 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 EIF4EBP2Q13542 120 aaPredicted RBP20.88■□□□□ 0.93
SYNE2-201ENST00000341472 CAMK2GQ13555 558 aaPredicted RBP20.88■□□□□ 0.93
SYNE2-201ENST00000341472 PTPRNQ16849 979 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 DUOXA1Q1HG43 343 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 SYCP2LQ5T4T6 812 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 RAP1GAP2Q684P5 730 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 SLC23A3Q6PIS1 610 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 SASS6Q6UVJ0 657 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 RBM43Q6ZSC3 357 aaKnown RBP20.88■□□□□ 0.93
SYNE2-201ENST00000341472 FAM183BPQ6ZVS7 135 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 OR2T3Q8NH03 318 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 FOXJ1Q92949 421 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 TTC17Q96AE7 1141 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 LMLNQ96KR4 655 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 PRICKLE1Q96MT3 831 aaPredicted RBP20.88■□□□□ 0.93
SYNE2-201ENST00000341472 STK33Q9BYT3 514 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 VPS16Q9H269 839 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 CD93Q9NPY3 652 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 PLCB1Q9NQ66 1216 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 DDIT4Q9NX09 232 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 WSB2Q9NYS7 404 aaPredicted RBP20.88■□□□□ 0.93
SYNE2-201ENST00000341472 USP36Q9P275 1121 aaKnown RBP20.88■□□□□ 0.93
SYNE2-201ENST00000341472 SLC6A14Q9UN76 642 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 FHOD1Q9Y613 1164 aa20.88■□□□□ 0.93
SYNE2-201ENST00000341472 KCNU1A8MYU2 1149 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 CDX4O14627 284 aaPredicted RBP20.87■□□□□ 0.93
SYNE2-201ENST00000341472 ERBB2P04626 1255 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 CFIP05156 583 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 TPM2P07951 284 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 UCHL3P15374 230 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 CYP11B1P15538 503 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 ABCB4P21439 1286 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 TACR2P21452 398 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 CCR1P32246 355 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 TPMTP51580 245 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 COPAP53621 1224 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 CDH18Q13634 790 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 PEAR1Q5VY43 1037 aaPredicted RBP20.87■□□□□ 0.93
SYNE2-201ENST00000341472 RABEPKQ7Z6M1 372 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 CHSY1Q86X52 802 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 SLC41A1Q8IVJ1 513 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 RGL4Q8IZJ4 473 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 HSPA12BQ96MM6 686 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 NUP58Q9BVL2 599 aa20.87■□□□□ 0.93
SYNE2-201ENST00000341472 NAA15Q9BXJ9 866 aaKnown RBP20.87■□□□□ 0.93
SYNE2-201ENST00000341472 KIAA1522Q9P206 1035 aaPredicted RBP20.87■□□□□ 0.93
SYNE2-201ENST00000341472 ATXN2Q99700 1313 aaKnown RBP20.86■□□□□ 0.93
SYNE2-201ENST00000341472 SYNJ2BP-COX16A0A087WUM0 186 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 H0Y626 953 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 LUC7L3O95232 432 aaKnown RBP20.86■□□□□ 0.93
SYNE2-201ENST00000341472 ST8SIA6P61647 398 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 PTPN20Q4JDL3 420 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 WDR45BQ5MNZ6 344 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 OLFML1Q6UWY5 402 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 ZDHHC17Q8IUH5 632 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 ZNF366Q8N895 744 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 GPR174Q9BXC1 333 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 ANO10Q9NW15 660 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 FANCLQ9NW38 375 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 COX16Q9P0S2 106 aa20.86■□□□□ 0.93
SYNE2-201ENST00000341472 KIAA1549LQ6ZVL6 1849 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 F5H5T6 163 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 MOCS3O95396 460 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms