RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 SLC9B1Q4ZJI4 515 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 SH3D19Q5HYK7 790 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 FAM91A1Q658Y4 838 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 PDPK2PQ6A1A2 396 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 ZPBP2Q6X784 338 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 NAPRTQ6XQN6 538 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 ACVR1CQ8NER5 493 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 DCPSQ96C86 337 aaKnown RBP12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 NDNQ99608 321 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 CNPY3Q9BT09 278 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 RMI1Q9H9A7 625 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 IFT122Q9HBG6 1241 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 PREBQ9HCU5 417 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 PNPLA8Q9NP80 782 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 XPNPEP3Q9NQH7 507 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 THAP1Q9NVV9 213 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 PDP2Q9P2J9 529 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 MED7O43513 233 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 CREB3O43889 395 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 PGK2P07205 417 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 ARSAP15289 507 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 SERPINB5P36952 375 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 OAZ1P54368 228 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 HDAC4P56524 1084 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 IRF9Q00978 393 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 GOLGA7BQ2TAP0 167 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 GJC2Q5T442 439 aaPredicted RBP12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 PPP1R26Q5T8A7 1209 aaPredicted RBP12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 PPP1R2P3Q6NXS1 205 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 USP50Q70EL3 339 aaPredicted RBP12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 ACOT1Q86TX2 421 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 CCDC185Q8N715 623 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 ZNF781Q8N8C0 355 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 NIFKQ9BYG3 293 aaKnown RBP12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 BCO2Q9BYV7 579 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 WDR55Q9H6Y2 383 aaPredicted RBP12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 APOBEC2Q9Y235 224 aaKnown RBP12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 NME7Q9Y5B8 376 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 MRPL42Q9Y6G3 142 aaKnown RBP12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 OTOFQ9HC10 1997 aa12.3□□□□□ -0.44
CCDC144CP-201ENST00000340196 SPDYE16A6NNV3 312 aaPredicted RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 IL1BP01584 269 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 ATP6V1B1P15313 513 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 AOC1P19801 751 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 BTKQ06187 659 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 TFDP2Q14188 446 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 MMEL1Q495T6 779 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 MPZL3Q6UWV2 235 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 MARK2Q7KZI7 788 aaKnown RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 SDCCAG8Q86SQ7 713 aaPredicted RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 TTC30AQ86WT1 665 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 WDR75Q8IWA0 830 aaKnown RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 KHSRPQ92945 711 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 USP13Q92995 863 aaPredicted RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 OR52B2Q96RD2 323 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 NR1H4Q96RI1 486 aaPredicted RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 ZNF180Q9UJW8 692 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 INPP5FQ9Y2H2 1132 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 SCN4AP35499 1836 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 STX16-NPEPL1H3BU86 382 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 NDC80O14777 642 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 PLIN3O60664 434 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 VCLP18206 1134 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 INHBCP55103 352 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 WASHC5Q12768 1159 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 TBL3Q12788 808 aaKnown RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 TMCO4Q5TGY1 634 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 PTAR1Q7Z6K3 402 aaPredicted RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 FAM156AQ8NDB6 213 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 PPP2R3CQ969Q6 453 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 CDHR1Q96JP9 859 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 AGAP3Q96P47 875 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 NRDE2Q9H7Z3 1164 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 RPF1Q9H9Y2 349 aaKnown RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 GALNT8Q9NY28 637 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 APPL1Q9UKG1 709 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 H3BNX3 289 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 AIM2O14862 343 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 SPAG6O75602 509 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 STAG3L1P0CL83 205 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 GOT1P17174 413 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 NELFEP18615 380 aaKnown RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 L1CAMP32004 1257 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 PKNOX1P55347 436 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 PITX1P78337 314 aaPredicted RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 MED21Q13503 144 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 TLR1Q15399 786 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 STILQ15468 1287 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 GSTA3Q16772 222 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 PABPC1LQ4VXU2 614 aaKnown RBP12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 LGSNQ5TDP6 509 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 XRRA1Q6P2D8 792 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 PACS1Q6VY07 963 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 CATSPERGQ6ZRH7 1159 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 C7orf31Q8N865 590 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 SLX1AQ9BQ83 275 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 PTPRHQ9HD43 1115 aa12.29□□□□□ -0.44
CCDC144CP-201ENST00000340196 SYBUQ9NX95 663 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms