RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ARL4AP40617 200 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 NR2C2P49116 596 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 MBTPS1Q14703 1052 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 TPSAB1Q15661 275 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 ANKRD20A2Q5SQ80 823 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 ANKRD20A1Q5TYW2 823 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 ANKRD20A3Q5VUR7 823 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 CES4AQ5XG92 561 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 TTC7BQ86TV6 843 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 PIGZQ86VD9 579 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 TFB1MQ8WVM0 346 aaKnown RBP16.8■□□□□ 0.28
LITAF-201ENST00000339430 CRISPLD2Q9H0B8 497 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 SEPT10Q9P0V9 454 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 CACNG4Q9UBN1 327 aa16.8■□□□□ 0.28
LITAF-201ENST00000339430 MEIS3P2A8K0S8 358 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 MGEA5O60502 916 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 KRT38O76015 456 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 GM2AP17900 193 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 IGFBP6P24592 240 aaPredicted RBP16.79■□□□□ 0.28
LITAF-201ENST00000339430 NDUFV1P49821 464 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 MNX1P50219 401 aaPredicted RBP16.79■□□□□ 0.28
LITAF-201ENST00000339430 IRX4P78413 519 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 TMPRSS15P98073 1019 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 CDK16Q00536 496 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 AP1B1Q10567 949 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 OSTM1Q86WC4 334 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 ADGRF2Q8IZF7 708 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 NDUFAF2Q8N183 169 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 LRRC39Q96DD0 335 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 OXNAD1Q96HP4 312 aaPredicted RBP16.79■□□□□ 0.28
LITAF-201ENST00000339430 MIPEPQ99797 713 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 SEZ6LQ9BYH1 1024 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 PCDHA11Q9Y5I1 949 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 FAM159BA6NKW6 160 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 ZNF487B1APH4 448 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 CREB3O43889 395 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 CD4P01730 458 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 KITP10721 976 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 PTPN4P29074 926 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 MATKP42679 507 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 TAF6P49848 677 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 SESN2P58004 480 aaPredicted RBP16.79■□□□□ 0.28
LITAF-201ENST00000339430 CHI3L2Q15782 390 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 TLDC1Q6P9B6 456 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 PDCD7Q8N8D1 485 aaKnown RBP16.79■□□□□ 0.28
LITAF-201ENST00000339430 COLGALT1Q8NBJ5 622 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 ZNF560Q96MR9 790 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 FZD10Q9ULW2 581 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 USP3Q9Y6I4 520 aa16.79■□□□□ 0.28
LITAF-201ENST00000339430 HUS1O60921 280 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 HSPA1AP0DMV8 641 aaKnown RBP16.78■□□□□ 0.28
LITAF-201ENST00000339430 HSPA1BP0DMV9 641 aaKnown RBP16.78■□□□□ 0.28
LITAF-201ENST00000339430 ELF1P32519 619 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 ACADSBP45954 432 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 BST1Q10588 318 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 CBLBQ13191 982 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 NME3Q13232 169 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 SEMA5AQ13591 1074 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 C4orf22Q6V702 233 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 ALYREFQ86V81 257 aaKnown RBP16.78■□□□□ 0.28
LITAF-201ENST00000339430 B3GALNT2Q8NCR0 500 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 TTC8Q8TAM2 541 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 LPPQ93052 612 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 SKA1Q96BD8 255 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 ZFP42Q96MM3 310 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 ADAM2Q99965 735 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 SAR1AQ9NR31 198 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 ARHGEF4Q9NR80 690 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 ARMCX1Q9P291 453 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 MARCOQ9UEW3 520 aaPredicted RBP16.78■□□□□ 0.28
LITAF-201ENST00000339430 MTO1Q9Y2Z2 717 aaKnown RBP16.78■□□□□ 0.28
LITAF-201ENST00000339430 SQORQ9Y6N5 450 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 H0Y3Z8 333 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 I3L4J1 428 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 DGKIO75912 1065 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 EFHC1Q5JVL4 640 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 RFWD3Q6PCD5 774 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 LRRC8DQ7L1W4 858 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 STRADAQ7RTN6 431 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 TP53INP2Q8IXH6 220 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 KIRREL3Q8IZU9 778 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 CCNYQ8ND76 341 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 DIS3LQ8TF46 1054 aaKnown RBP16.78■□□□□ 0.28
LITAF-201ENST00000339430 E2F7Q96AV8 911 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 ARMC5Q96C12 935 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 OLFM3Q96PB7 478 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 XAB2Q9HCS7 855 aaKnown RBP16.78■□□□□ 0.28
LITAF-201ENST00000339430 IL1RAPL1Q9NZN1 696 aa16.78■□□□□ 0.28
LITAF-201ENST00000339430 PEX11AO75192 247 aa16.77■□□□□ 0.28
LITAF-201ENST00000339430 ENTPD5O75356 428 aa16.77■□□□□ 0.28
LITAF-201ENST00000339430 WFS1O76024 890 aa16.77■□□□□ 0.28
LITAF-201ENST00000339430 TGDSO95455 350 aa16.77■□□□□ 0.28
LITAF-201ENST00000339430 CCNFP41002 786 aa16.77■□□□□ 0.28
LITAF-201ENST00000339430 RPL34P49207 117 aaKnown RBP16.77■□□□□ 0.28
LITAF-201ENST00000339430 SLC25A52Q3SY17 297 aa16.77■□□□□ 0.28
LITAF-201ENST00000339430 OTUD1Q5VV17 481 aaPredicted RBP16.77■□□□□ 0.28
LITAF-201ENST00000339430 ZCCHC23Q6ZST2 131 aa16.77■□□□□ 0.28
LITAF-201ENST00000339430 NUDCD3Q8IVD9 361 aa16.77■□□□□ 0.28
LITAF-201ENST00000339430 ARID3BQ8IVW6 561 aaPredicted RBP16.77■□□□□ 0.28
LITAF-201ENST00000339430 HSFY1Q96LI6 401 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms