RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 MFSD11O43934 449 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 AVILO75366 819 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 SPAG6O75602 509 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 STK10O94804 968 aaKnown RBP11.43□□□□□ -0.58
LRP1-202ENST00000338962 VIMP08670 466 aaKnown RBP11.43□□□□□ -0.58
LRP1-202ENST00000338962 LINC00271P0C7V0 271 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 ADRA1BP35368 520 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 MAGEA6P43360 314 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 YWHAHQ04917 246 aaPredicted RBP11.43□□□□□ -0.58
LRP1-202ENST00000338962 SWT1Q5T5J6 900 aaKnown RBP11.43□□□□□ -0.58
LRP1-202ENST00000338962 FAM117BQ6P1L5 589 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 RFX8Q6ZV50 586 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 YTHDF3Q7Z739 585 aaKnown RBP11.43□□□□□ -0.58
LRP1-202ENST00000338962 PACS2Q86VP3 889 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 SUGP1Q8IWZ8 645 aaKnown RBP11.43□□□□□ -0.58
LRP1-202ENST00000338962 CACNA2D3Q8IZS8 1091 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 LRRC43Q8N309 656 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 OTUD6BQ8N6M0 293 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 OR10T2Q8NGX3 314 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 IRGQQ8WZA9 623 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 EDEM1Q92611 657 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 SMC6Q96SB8 1091 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 CYTH2Q99418 400 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 NSRP1Q9H0G5 558 aaKnown RBP11.43□□□□□ -0.58
LRP1-202ENST00000338962 MLXIPLQ9NP71 852 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.43□□□□□ -0.584e-7■■□□□ 13.9
LRP1-202ENST00000338962 PCDHA11Q9Y5I1 949 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 TEX264Q9Y6I9 313 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 PDE4DIPQ5VU43 2346 aa11.43□□□□□ -0.58
LRP1-202ENST00000338962 SF3B1O75533 1304 aaKnown RBP eCLIP11.42□□□□□ -0.58
LRP1-202ENST00000338962 GRXCR1A8MXD5 290 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 DDHD2O94830 711 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 F9P00740 461 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 DRD4P21917 467 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 STX2P32856 288 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 YWHAGP61981 247 aaKnown RBP eCLIP11.42□□□□□ -0.58
LRP1-202ENST00000338962 SATB1Q01826 763 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 SCAPQ12770 1279 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 BTG3Q14201 252 aaPredicted RBP11.42□□□□□ -0.58
LRP1-202ENST00000338962 LRIT3Q3SXY7 679 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 CD300LGQ6UXG3 332 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 ZNF280BQ86YH2 543 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 COLGALT2Q8IYK4 626 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 CLP1Q92989 425 aaKnown RBP11.42□□□□□ -0.58
LRP1-202ENST00000338962 PGAP3Q96FM1 320 aaPredicted RBP11.42□□□□□ -0.58
LRP1-202ENST00000338962 SGSM3Q96HU1 749 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 PAFAH2Q99487 392 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 LGMNQ99538 433 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 TRIM62Q9BVG3 475 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 COLEC11Q9BWP8 271 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 TRABDQ9H4I3 376 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 CWH43Q9H720 699 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 WDR6Q9NNW5 1121 aaKnown RBP11.42□□□□□ -0.58
LRP1-202ENST00000338962 PNPLA8Q9NP80 782 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 IKBKGQ9Y6K9 419 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 TSC2P49815 1807 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 CEP290O15078 2479 aa11.42□□□□□ -0.58
LRP1-202ENST00000338962 A0A0A0MRY4 1105 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 TCRBV9S1A1TA0A576 114 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 F8W810 466 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 PPP1R12AO14974 1030 aaPredicted RBP11.41□□□□□ -0.58
LRP1-202ENST00000338962 METTL18O95568 372 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 TYMPP19971 482 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 MSH2P43246 934 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 AP1B1Q10567 949 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 MPP2Q14168 576 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 EFTUD2Q15029 972 aaKnown RBP eCLIP11.41□□□□□ -0.581e-7■■■■□ 19.3
LRP1-202ENST00000338962 PDK1Q15118 436 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 BSPRYQ5W0U4 402 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 C4orf50Q6ZRC1 276 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 CCDC91Q7Z6B0 441 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 SPATA2LQ8IUW3 424 aaPredicted RBP11.41□□□□□ -0.58
LRP1-202ENST00000338962 IGDCC3Q8IVU1 814 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 CCNYQ8ND76 341 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 SEC16BQ96JE7 1060 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 CABS1Q96KC9 395 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 SPATA13Q96N96 652 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 PKMYT1Q99640 499 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 TMLHEQ9NVH6 421 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 FBXW11Q9UKB1 542 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 SMG5Q9UPR3 1016 aaKnown RBP11.41□□□□□ -0.58
LRP1-202ENST00000338962 COLQQ9Y215 455 aaPredicted RBP11.41□□□□□ -0.58
LRP1-202ENST00000338962 LAMA3Q16787 3333 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 COL4A6Q14031 1691 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 CARNS1A5YM72 827 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 ANKRD65E5RJM6 399 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 PIAS1O75925 651 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 VAV1P15498 845 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 TPSB2P20231 275 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 TPI1P60174 286 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 SMAD3P84022 425 aaKnown RBP11.41□□□□□ -0.58
LRP1-202ENST00000338962 DPYSQ14117 519 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 TPSAB1Q15661 275 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 PM20D1Q6GTS8 502 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 PDZD4Q76G19 769 aaPredicted RBP11.41□□□□□ -0.58
LRP1-202ENST00000338962 BHLHA9Q7RTU4 235 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 LRRTM3Q86VH5 581 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 LRRC34Q8IZ02 419 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 MCUQ8NE86 351 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 GDAP1Q8TB36 358 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms