RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SUGP1Q8IWZ8 645 aaKnown RBP12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 ARFGAP1Q8N6T3 406 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 CCDC185Q8N715 623 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 BHMTQ93088 406 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 RPRD1AQ96P16 312 aaPredicted RBP12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 PPP1R9BQ96SB3 815 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 DESI2Q9BSY9 194 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 TSGA10Q9BZW7 698 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 PLK2Q9NYY3 685 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 STIM2Q9P246 746 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 OR12D3Q9UGF7 316 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 VANGL2Q9ULK5 521 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 FZD10Q9ULW2 581 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 USP18Q9UMW8 372 aa12.31□□□□□ -0.44
SPTLC1-202ENST00000337841 KANSL1LA0AUZ9 987 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 RCCD1A6NED2 376 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 TMEM221A6NGB7 291 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 DRGXA6NNA5 263 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 M0R296 226 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 GFRA2O00451 464 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 CACNG3O60359 315 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 TULP3O75386 442 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 APODP05090 189 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 DRD1P21728 446 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 L1CAMP32004 1257 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 SLC6A11P48066 632 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 OXCT1P55809 520 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 NRG1Q02297 640 aaPredicted RBP12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 IER5LQ5T953 404 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 FYB2Q5VWT5 728 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 GRAMD4Q6IC98 578 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 C14orf80Q86SX3 495 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 CFAP52Q8N1V2 620 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 CCDC26Q8TAB7 109 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 LACRTQ9GZZ8 138 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 EPHX3Q9H6B9 360 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 RETREG1Q9H6L5 497 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 ANLNQ9NQW6 1124 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 TMPRSS4Q9NRS4 437 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 DNAJC17Q9NVM6 304 aaKnown RBP12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 FBXO10Q9UK96 956 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 TFR2Q9UP52 801 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 DENND4CQ5VZ89 1909 aa12.3□□□□□ -0.44
SPTLC1-202ENST00000337841 MYO16Q9Y6X6 1858 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 TBC1D3BA6NDS4 549 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 FAM170BA6NMN3 283 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 E9PAM4 449 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 H0Y626 953 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 TIMM44O43615 452 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 KRT86O43790 486 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 CLDN11O75508 207 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 KRT7P08729 469 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 CD72P21854 359 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 HTR7P34969 479 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 OPRD1P41143 372 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 GRIA2P42262 883 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 DGKGP49619 791 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 ZNF135P52742 658 aaPredicted RBP12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 CDH4P55283 916 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 RPS24P62847 133 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 ZNF177Q13360 481 aaPredicted RBP12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 UBXN2BQ14CS0 331 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 PON2Q15165 354 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 E2F5Q15329 346 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 C5orf22Q49AR2 442 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 RWDD4Q6NW29 188 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 ETFBKMTQ8IXQ9 262 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 CARNMT1Q8N4J0 409 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 RNF10Q8N5U6 811 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 FLCNQ8NFG4 579 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 FIBINQ8TAL6 211 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 TEKT4Q8WW24 435 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 IGSF8Q969P0 613 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 PBXIP1Q96AQ6 731 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 CHFRQ96EP1 664 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 ZNF830Q96NB3 372 aaPredicted RBP12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 EPAS1Q99814 870 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 OSBPL6Q9BZF3 934 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 ZYG11BQ9C0D3 744 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 DHX35Q9H5Z1 703 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 ZWILCHQ9H900 591 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 TBC1D17Q9HA65 648 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 ARHGEF4Q9NR80 690 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 DONSONQ9NYP3 566 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 KIAA1522Q9P206 1035 aaPredicted RBP12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 PPARGC1AQ9UBK2 798 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 NDRG2Q9UN36 371 aaKnown RBP12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 AP4E1Q9UPM8 1137 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 SNX10Q9Y5X0 201 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 ALG6Q9Y672 507 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 DUSP10Q9Y6W6 482 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 MYO10Q9HD67 2058 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 EYSQ5T1H1 3165 aa12.29□□□□□ -0.44
SPTLC1-202ENST00000337841 XIRP2A4UGR9 3374 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 OBSL1O75147 1896 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 NUP210Q8TEM1 1887 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 A0A0A0MRY4 1105 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 A0A1B0GVM2 712 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 TCAF2A6NFQ2 919 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms