RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 NCF1BA6NI72 391 aaPredicted RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 NCF1CA8MVU1 366 aaPredicted RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 E5RI56 91 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 MAP3K13O43283 966 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 SEC24DO94855 1032 aaPredicted RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 RTN3O95197 1032 aaPredicted RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 LSM8O95777 96 aaKnown RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 PROCP04070 461 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 LYNP07948 512 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 OR4Q2P0C623 313 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 ERVK-10P10266 1014 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 NCF1P14598 390 aaPredicted RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 ANPEPP15144 967 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 NELFEP18615 380 aaKnown RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 CD52P31358 61 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 BST2Q10589 180 aaKnown RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 PPIL2Q13356 520 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 DPYSL3Q14195 570 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 ITPRIPL1Q6GPH6 555 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 KRT80Q6KB66 452 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 SLC39A4Q6P5W5 647 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 MTHFD1LQ6UB35 978 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 RBM15BQ8NDT2 890 aaKnown RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 STKLD1Q8NE28 680 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 C10orf82Q8WW14 230 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 EMID1Q96A84 441 aaPredicted RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 TMA16Q96EY4 203 aaKnown RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 ASIC4Q96FT7 647 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 SPATA17Q96L03 361 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 TEPSINQ96N21 525 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 SNRNP25Q9BV90 132 aaKnown RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 Q9H521 79 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 IARS2Q9NSE4 1012 aaKnown RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 SLC38A7Q9NVC3 462 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 SYNPO2Q9UMS6 1093 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 TNFSF13BQ9Y275 285 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 ANKRD31Q8N7Z5 1873 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 PLIN4Q96Q06 1357 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 MYH11P35749 1972 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 ARHGEF37A1IGU5 675 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 PRR5-ARHGAP8B1AHC4 643 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 E7ENQ6 273 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 HNRNPCL1O60812 293 aaKnown RBP6.64□□□□□ -1.35
HMG20A-201ENST00000336216 LYPLA2O95372 231 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 ERBB2P04626 1255 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 F7P08709 466 aaPredicted RBP6.64□□□□□ -1.35
HMG20A-201ENST00000336216 PIRTP0C851 137 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 CCNB1P14635 433 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 ACADSBP45954 432 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 RTP1P59025 263 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 ARHGAP8P85298 464 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 SLC6A3Q01959 620 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 MORF4L2Q15014 288 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 PMF1Q6P1K2 205 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 PTAR1Q7Z6K3 402 aaPredicted RBP6.64□□□□□ -1.35
HMG20A-201ENST00000336216 RAB44Q7Z6P3 723 aaPredicted RBP6.64□□□□□ -1.35
HMG20A-201ENST00000336216 CTU1Q7Z7A3 348 aaKnown RBP6.64□□□□□ -1.35
HMG20A-201ENST00000336216 SPATA6LQ8N4H0 392 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 GIPC2Q8TF65 315 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 SRPK1Q96SB4 655 aaKnown RBP6.64□□□□□ -1.35
HMG20A-201ENST00000336216 GRIP2Q9C0E4 1043 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 MUC3BQ9H195 1237 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 TMEM134Q9H6X4 195 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 VTA1Q9NP79 307 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 AVENQ9NQS1 362 aaPredicted RBP6.64□□□□□ -1.35
HMG20A-201ENST00000336216 MOSPD1Q9UJG1 213 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 NOCTQ9UK39 431 aaKnown RBP6.64□□□□□ -1.35
HMG20A-201ENST00000336216 SLC27A5Q9Y2P5 690 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 LRRC42Q9Y546 428 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 ZMYM2Q9UBW7 1377 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 KIAA1551Q9HCM1 1747 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 TMEM191CA6NGB0 347 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 SIGLEC16A6NMB1 481 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 RNF103O00237 685 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 LIASO43766 372 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 PAMP19021 973 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 LMO2P25791 158 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 CDC42EP1Q00587 391 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 GBE1Q04446 702 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 BST1Q10588 318 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 CCL14Q16627 93 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 CTXN3Q4LDR2 81 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 FAM171A1Q5VUB5 890 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 ANKRD22Q5VYY1 191 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 ASRGL1Q7L266 308 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 STRA8Q7Z7C7 330 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 RNF180Q86T96 592 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 TMPRSS6Q8IU80 811 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 DEFB107AQ8IZN7 70 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 PYROXD2Q8N2H3 581 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 GDPD5Q8WTR4 605 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 MIPEPQ99797 713 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 EGFL8Q99944 293 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 ELOVL4Q9GZR5 314 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 TKTL2Q9H0I9 626 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 DPEP3Q9H4B8 488 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 CYP3A43Q9HB55 503 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 PCDH9Q9HC56 1237 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 NT5MQ9NPB1 228 aa6.64□□□□□ -1.35
HMG20A-201ENST00000336216 RBM22Q9NW64 420 aaKnown RBP eCLIP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms