RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 WASH3PC4AMC7 463 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 TAF4O00268 1085 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 GDF9O60383 454 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 NDUFS2O75306 463 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 CD44P16070 742 aaKnown RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 PRKCHP24723 683 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 PMS1P54277 932 aaKnown RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 UBE2HP62256 183 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 RACK1P63244 317 aaKnown RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 IRX4P78413 519 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 ZNF252P-AS1Q0IIN9 211 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 CCDC15Q0P6D6 951 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 PNOCQ13519 176 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SMAD1Q15797 465 aaKnown RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 GEN1Q17RS7 908 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 ANO4Q32M45 955 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 C9orf64Q5T6V5 341 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SH3PXD2AQ5TCZ1 1133 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 HEATR6Q6AI08 1181 aaKnown RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 KIAA1211LQ6NV74 962 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 UNQ6494/PRO21346Q6UXR6 183 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 FAM71AQ8IYT1 594 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SIX6OS1Q8N1H7 587 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 GALNT15Q8N3T1 639 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SDR16C5Q8N3Y7 309 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 HDDC3Q8N4P3 179 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 ST13P5Q8NFI4 369 aaPredicted RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 FRS2Q8WU20 508 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SKA1Q96BD8 255 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 TMA16Q96EY4 203 aaKnown RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 LRIG1Q96JA1 1093 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SIX2Q9NPC8 291 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 FAM49BQ9NUQ9 324 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 MYO6Q9UM54 1294 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 ERVW-1Q9UQF0 538 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 HS3ST2Q9Y278 367 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 ZNF292O60281 2723 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 A0A1B0GTQ1 180 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 YJEFN3A6XGL0 299 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 WASH4PA8MWX3 477 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 E7ENQ6 273 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 RNF225M0QZC1 329 aaPredicted RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 TNFSF14O43557 240 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 PLRG1O43660 514 aaKnown RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 MOCS3O95396 460 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 HSP90AA1P07900 732 aaKnown RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 HLA-FP30511 346 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 MATKP42679 507 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 CXCR3P49682 368 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 AFF3P51826 1226 aaKnown RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 ZNF135P52742 658 aaPredicted RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 SEC13P55735 322 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 RPL6Q02878 288 aaKnown RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 CREB5Q02930 508 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 MBLAC2Q68D91 279 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 PMF1Q6P1K2 205 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 CCDC33Q8N5R6 958 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 DQX1Q8TE96 717 aaKnown RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 NELFBQ8WX92 580 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 PRICKLE1Q96MT3 831 aaPredicted RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 NACA2Q9H009 215 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 TMEM74BQ9NUR3 256 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 SMPD4Q9NXE4 827 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 APEX2Q9UBZ4 518 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 ZNF212Q9UDV6 495 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 SLC12A6Q9UHW9 1150 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 DACH1Q9UI36 760 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 HS3ST3A1Q9Y663 406 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 DOCK4Q8N1I0 1966 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 SPAG17Q6Q759 2223 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 CACNA1IQ9P0X4 2223 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 BCAT2O15382 392 aaPredicted RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 SYNCRIPO60506 623 aaKnown RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 TBX18O95935 607 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 NOS2P35228 1153 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 DHPSP49366 369 aaPredicted RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 CDH4P55283 916 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 ADIGQ0VDE8 80 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 EFEMP1Q12805 493 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 KCNH2Q12809 1159 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 TTC31Q49AM3 519 aaPredicted RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 SLC45A4Q5BKX6 768 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 RABGAP1LQ5R372 815 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 DCAF12L1Q5VU92 463 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 ANO7Q6IWH7 933 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 XKR5Q6UX68 686 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 TRIM72Q6ZMU5 477 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 GBP6Q6ZN66 633 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 C11orf57Q6ZUT1 292 aaPredicted RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 TMPRSS12Q86WS5 348 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 SFTPA1Q8IWL2 248 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 CENPIQ92674 756 aaPredicted RBP6.62□□□□□ -1.35
USP16-201ENST00000334352 SIPA1Q96FS4 1042 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 NPY6RQ99463 290 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 OSBPL2Q9H1P3 480 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 KIAA1468Q9P260 1216 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 NCKAP1Q9Y2A7 1128 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 CSNK1G3Q9Y6M4 447 aa6.62□□□□□ -1.35
USP16-201ENST00000334352 PLXNB3Q9ULL4 1909 aa6.61□□□□□ -1.35
USP16-201ENST00000334352 A0A1B0GVM2 712 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms