RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.44■□□□□ 0.22
CCDC28A-201ENST00000332797 TERB1Q8NA31 727 aa16.44■□□□□ 0.22
CCDC28A-201ENST00000332797 ARHGEF26Q96DR7 871 aa16.44■□□□□ 0.22
CCDC28A-201ENST00000332797 PANX2Q96RD6 677 aa16.44■□□□□ 0.22
CCDC28A-201ENST00000332797 PACSIN1Q9BY11 444 aa16.44■□□□□ 0.22
CCDC28A-201ENST00000332797 TRIM7Q9C029 511 aa16.44■□□□□ 0.22
CCDC28A-201ENST00000332797 SPATA6Q9NWH7 488 aaPredicted RBP16.44■□□□□ 0.22
CCDC28A-201ENST00000332797 VANGL2Q9ULK5 521 aa16.44■□□□□ 0.22
CCDC28A-201ENST00000332797 SNX10Q9Y5X0 201 aa16.44■□□□□ 0.22
CCDC28A-201ENST00000332797 K7EQS6 105 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 CYP1A2P05177 515 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 CISD3P0C7P0 127 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 MTAPQ13126 283 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 AUHQ13825 339 aaKnown RBP16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 GAS6Q14393 721 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 ARL13BQ3SXY8 428 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 RABGAP1LQ5R372 815 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 MPP7Q5T2T1 576 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 FBXL22Q6P050 247 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 SCYL2Q6P3W7 929 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 NUDT18Q6ZVK8 323 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 CARNMT1Q8N4J0 409 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 CTNNBL1Q8WYA6 563 aaPredicted RBP16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 RPRD1AQ96P16 312 aaPredicted RBP16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 NUP85Q9BW27 656 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 SLC2A11Q9BYW1 496 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 IMPACTQ9P2X3 320 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 FBXO10Q9UK96 956 aa16.43■□□□□ 0.22
CCDC28A-201ENST00000332797 GOLGA6L3A6NEY3 463 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 ANTXRLA6NF34 631 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 GOLGA6L6A8MZA4 724 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 H2AFZP0C0S5 128 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 ZNF252P-AS1Q0IIN9 211 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 H2AFVQ71UI9 128 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 ANKS1BQ7Z6G8 1248 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 C14orf80Q86SX3 495 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 CIR1Q86X95 450 aaPredicted RBP16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 MFN1Q8IWA4 741 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 CCDC185Q8N715 623 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 RPLP0P6Q8NHW5 317 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 WFDC5Q8TCV5 224 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 HAPLN3Q96S86 360 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 IER2Q9BTL4 223 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 SLC27A6Q9Y2P4 619 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 A0A0A0MRY4 1105 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 GALR2O43603 387 aaPredicted RBP16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 ADRA1BP35368 520 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 TNFRSF4P43489 277 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 CDH18Q13634 790 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 C2orf27AQ580R0 203 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 TTC39BQ5VTQ0 682 aaPredicted RBP16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 RNF43Q68DV7 783 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 PKN3Q6P5Z2 889 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 CCDC117Q8IWD4 279 aaPredicted RBP16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 CCDC26Q8TAB7 109 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 FNIP1Q8TF40 1166 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 IGSF8Q969P0 613 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 GRPEL1Q9HAV7 217 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 ABCB8Q9NUT2 735 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 CTTNBP2NLQ9P2B4 639 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 ANAPC7Q9UJX3 599 aa16.42■□□□□ 0.22
CCDC28A-201ENST00000332797 ZNF318Q5VUA4 2279 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 PRRT4C9JH25 899 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 H0Y626 953 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 LAMTOR5O43504 91 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 LUC7L3O95232 432 aaKnown RBP16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 TMEM253P0C7T8 217 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 HLA-FP30511 346 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 TIE1P35590 1138 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 IRAK1P51617 712 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 NUBP1P53384 320 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 GEN1Q17RS7 908 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 ACBD5Q5T8D3 534 aaPredicted RBP16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 LRRC31Q6UY01 552 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 SLFN11Q7Z7L1 901 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 C1orf210Q8IVY1 113 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 CCDC170Q8IYT3 715 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 SPEM1Q8N4L4 309 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 ZNF557Q8N988 423 aaPredicted RBP16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 ZNF564Q8TBZ8 553 aaPredicted RBP16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 USP33Q8TEY7 942 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 NTAN1Q96AB6 310 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 BTBD6Q96KE9 485 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 C1orf74Q96LT6 269 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 ZDHHC4Q9NPG8 344 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 GGA2Q9UJY4 613 aa16.41■□□□□ 0.22
CCDC28A-201ENST00000332797 A0A1B0GVM2 712 aa16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 TCAF2A6NFQ2 919 aa16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 SOWAHDA6NJG2 315 aa16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 E9PAM4 449 aa16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 SRGAP2O75044 1071 aa16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 RNF8O76064 485 aa16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 FECHP22830 423 aa16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 CD70P32970 193 aa16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 CYLC1P35663 651 aaPredicted RBP16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 EFHC2Q5JST6 749 aa16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 TMTC1Q8IUR5 882 aa16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 CCAR2Q8N163 923 aaKnown RBP16.4■□□□□ 0.22
CCDC28A-201ENST00000332797 ZNF513Q8N8E2 541 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms