RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ZNF830Q96NB3 372 aaPredicted RBP16.59■□□□□ 0.25
LRRC28-202ENST00000331450 BBS2Q9BXC9 721 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 MAGEB5Q9BZ81 275 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 SIK2Q9H0K1 926 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 PCSK1NQ9UHG2 260 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 CA14Q9ULX7 337 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 SNX10Q9Y5X0 201 aa16.59■□□□□ 0.25
LRRC28-202ENST00000331450 VCANP13611 3396 aa16.58■□□□□ 0.25
LRRC28-202ENST00000331450 NEDD8-MDP1E9PL57 170 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 FAM72CH0Y354 149 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 BUB1O43683 1085 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 TSPAN3O60637 253 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 CYBBP04839 570 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 TYRP14679 529 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 EIF2DP41214 584 aaKnown RBP16.58■□□□□ 0.24
LRRC28-202ENST00000331450 NOP2P46087 812 aaKnown RBP16.58■□□□□ 0.24
LRRC28-202ENST00000331450 IRAK1P51617 712 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 TAS2R40P59535 323 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 RPS24P62847 133 aaKnown RBP16.58■□□□□ 0.24
LRRC28-202ENST00000331450 PRKCQQ04759 706 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 ANO4Q32M45 955 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 EFHC2Q5JST6 749 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 FAM72AQ5TYM5 149 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 TXNRD3NBQ6F5E7 133 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 FAM72DQ6L9T8 149 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 TXNDC11Q6PKC3 985 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 TPRG1Q6ZUI0 275 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 FAM72BQ86X60 149 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 PSTKQ8IV42 348 aaKnown RBP16.58■□□□□ 0.24
LRRC28-202ENST00000331450 PHTF2Q8N3S3 785 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 TEKT4Q8WW24 435 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 IGSF8Q969P0 613 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 PLK2Q9NYY3 685 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 FBXO10Q9UK96 956 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 VANGL2Q9ULK5 521 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 AP4E1Q9UPM8 1137 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 PPP2R2CQ9Y2T4 447 aa16.58■□□□□ 0.24
LRRC28-202ENST00000331450 TMEM110-MUSTN1A8MSY1 372 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 E9PAM4 449 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 PI4K2BG5E9Z4 385 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 ALADP13716 330 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 L1CAMP32004 1257 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 STARD6P59095 220 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 CA9Q16790 459 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 ERMARDQ5T6L9 678 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 TTC39BQ5VTQ0 682 aaPredicted RBP16.57■□□□□ 0.24
LRRC28-202ENST00000331450 NAIF1Q69YI7 327 aaPredicted RBP16.57■□□□□ 0.24
LRRC28-202ENST00000331450 C1orf228Q6PIY5 440 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 PYROXD2Q8N2H3 581 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 LRRC57Q8N9N7 239 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 DDI1Q8WTU0 396 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 BHMTQ93088 406 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 TMA16Q96EY4 203 aaKnown RBP16.57■□□□□ 0.24
LRRC28-202ENST00000331450 TSGA10Q9BZW7 698 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 GOLPH3Q9H4A6 298 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 GPATCH2LQ9NWQ4 482 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 OR12D3Q9UGF7 316 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 FBXL21Q9UKT6 434 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 BDP1A6H8Y1 2624 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 TECTAO75443 2155 aa16.57■□□□□ 0.24
LRRC28-202ENST00000331450 TRIOO75962 3097 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 A0A1B0GVM2 712 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 TCAF2A6NFQ2 919 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 DRGXA6NNA5 263 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 KRT86O43790 486 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 TBL1XO60907 577 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 TULP3O75386 442 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 LRIG2O94898 1065 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 RARAP10276 462 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 HOXC13P31276 330 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 SLC1A1P43005 524 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 MESP2Q0VG99 397 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 DPYSL2Q16555 572 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 BOLA3Q53S33 107 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 RABGAP1LQ5R372 815 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 TRIM67Q6ZTA4 783 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 POLNQ7Z5Q5 900 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 SIX5Q8N196 739 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 CFAP52Q8N1V2 620 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 FAM71BQ8TC56 605 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 RPRD1AQ96P16 312 aaPredicted RBP16.56■□□□□ 0.24
LRRC28-202ENST00000331450 SLC2A11Q9BYW1 496 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 PPARGC1AQ9UBK2 798 aaKnown RBP16.56■□□□□ 0.24
LRRC28-202ENST00000331450 ZNF212Q9UDV6 495 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 CLEC4EQ9ULY5 219 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 CAPN6Q9Y6Q1 641 aa16.56■□□□□ 0.24
LRRC28-202ENST00000331450 NYNRINQ9P2P1 1898 aaKnown RBP16.56■□□□□ 0.24
LRRC28-202ENST00000331450 NCOR1O75376 2440 aa16.55■□□□□ 0.24
LRRC28-202ENST00000331450 MACROD2A1Z1Q3 448 aa16.55■□□□□ 0.24
LRRC28-202ENST00000331450 TYW5A2RUC4 315 aaKnown RBP16.55■□□□□ 0.24
LRRC28-202ENST00000331450 GRID2IPA4D2P6 1211 aa16.55■□□□□ 0.24
LRRC28-202ENST00000331450 TNFRSF10AO00220 468 aa16.55■□□□□ 0.24
LRRC28-202ENST00000331450 LUC7L3O95232 432 aaKnown RBP16.55■□□□□ 0.24
LRRC28-202ENST00000331450 COMTP21964 271 aa16.55■□□□□ 0.24
LRRC28-202ENST00000331450 SLC6A11P48066 632 aa16.55■□□□□ 0.24
LRRC28-202ENST00000331450 AMPD2Q01433 879 aa16.55■□□□□ 0.24
LRRC28-202ENST00000331450 HADHQ16836 314 aaKnown RBP16.55■□□□□ 0.24
LRRC28-202ENST00000331450 SMTNL2Q2TAL5 461 aa16.55■□□□□ 0.24
LRRC28-202ENST00000331450 ALFQ53S48 1182 aa16.55■□□□□ 0.24
LRRC28-202ENST00000331450 TMEM196Q5HYL7 178 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms