RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 TRPA1O75762 1119 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 SLC25A27O95847 323 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 ITGBL1O95965 494 aaPredicted RBP18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 ARRB2P32121 409 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 ATP5OP48047 213 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 CNTN2Q02246 1040 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 ZBTB41Q5SVQ8 909 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 DEPDC1BQ8WUY9 529 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 COPS7BQ9H9Q2 264 aaPredicted RBP18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 TJP2Q9UDY2 1190 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 PLIN3O60664 434 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 EIF4BP23588 611 aaKnown RBP18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 KLF10Q13118 480 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 MMRN1Q13201 1228 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 STXBP2Q15833 593 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 PTPN20Q4JDL3 420 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 FSCBQ5H9T9 825 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 ZFP1Q6P2D0 407 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 LILRA2Q8N149 483 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 EMC1Q8N766 993 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 RIN3Q8TB24 985 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 FNIP1Q8TF40 1166 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 TFAP2BQ92481 460 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 HAPLN2Q9GZV7 340 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 SDCBP2Q9H190 292 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 RSAD1Q9HA92 442 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 PRPF19Q9UMS4 504 aaKnown RBP18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 FAF1Q9UNN5 650 aaPredicted RBP18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 DKC1O60832 514 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLSTN3-202ENST00000331148 FKBP1BP68106 108 aa18.59■□□□□ 0.57
CLSTN3-202ENST00000331148 Q6ZNX1 250 aa18.59■□□□□ 0.57
CLSTN3-202ENST00000331148 CROCCP3Q8IVE0 287 aa18.59■□□□□ 0.57
CLSTN3-202ENST00000331148 GALNT4Q8N4A0 578 aa18.59■□□□□ 0.57
CLSTN3-202ENST00000331148 LRRC39Q96DD0 335 aa18.59■□□□□ 0.57
CLSTN3-202ENST00000331148 HAUS8Q9BT25 410 aa18.59■□□□□ 0.57
CLSTN3-202ENST00000331148 PCDH18Q9HCL0 1135 aa18.59■□□□□ 0.57
CLSTN3-202ENST00000331148 TXNRD2Q9NNW7 524 aa18.59■□□□□ 0.57
CLSTN3-202ENST00000331148 PAIP2BQ9ULR5 123 aaKnown RBP18.59■□□□□ 0.57
CLSTN3-202ENST00000331148 HEMK1Q9Y5R4 338 aaPredicted RBP18.59■□□□□ 0.57
CLSTN3-202ENST00000331148 BOLA2-SMG1P6H3BVE0 249 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 KCNN4O15554 427 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 GLRA3O75311 464 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 APRTP07741 180 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 ZNF23P17027 643 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 GRK2P25098 689 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 MIPP30301 263 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 ABCD1P33897 745 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 CDK9P50750 372 aaKnown RBP18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 FLOT2Q14254 428 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 PDK1Q15118 436 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 SLC44A4Q53GD3 710 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 C10orf107Q8IVU9 208 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 RDM1Q8NG50 284 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 BIRC8Q96P09 236 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 SERPINI1Q99574 410 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 IMPG2Q9BZV3 1241 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 PCDHGC3Q9UN70 934 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 STYXL1Q9Y6J8 313 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 LCTP09848 1927 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 KIAA1217Q5T5P2 1943 aa18.58■□□□□ 0.57
CLSTN3-202ENST00000331148 KCNA2P16389 499 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 THOP1P52888 689 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 Q3C1V9 767 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 DENND1BQ6P3S1 775 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 DHRS4L2Q6PKH6 230 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 POTEHQ6S545 545 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 PATL1Q86TB9 770 aaKnown RBP18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 TSPAN14Q8NG11 270 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 KBTBD7Q8WVZ9 684 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 KLC2Q9H0B6 622 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 LIN28AQ9H9Z2 209 aaKnown RBP18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 GBA2Q9HCG7 927 aaPredicted RBP18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 CYP26B1Q9NR63 512 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 ZNHIT2Q9UHR6 403 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 KAT6AQ92794 2004 aa18.58■□□□□ 0.56
CLSTN3-202ENST00000331148 SPATA31C2B4DYI2 1134 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 KLHL41O60662 606 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 TRUB2O95900 331 aaKnown RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 XRCC1P18887 633 aaPredicted RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 CNTFP26441 200 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 MAGEA6P43360 314 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 NUDT2P50583 147 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 ABCE1P61221 599 aaKnown RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 MPP5Q8N3R9 675 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 RTP4Q96DX8 246 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 PKP2Q99959 881 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 POLR3FQ9H1D9 316 aaPredicted RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 CISHQ9NSE2 258 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 ZNF711Q9Y462 761 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 PCDHA10Q9Y5I2 948 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 CNTNAP2Q9UHC6 1331 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 SH3PXD2BA1X283 911 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 ALDOAP04075 364 aaKnown RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 POLR2BP30876 1174 aaKnown RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 HARS2P49590 506 aaKnown RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 PSMC1P62191 440 aaKnown RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 MTA1Q13330 715 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 PDE1CQ14123 709 aaPredicted RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 LPCAT2Q7L5N7 544 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 C2orf69Q8N8R5 385 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms