RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 TBL1XO60907 577 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 LETM1O95202 739 aaPredicted RBP14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 CFIP05156 583 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 GLI1P08151 1106 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 ACADMP11310 421 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 GNSP15586 552 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 SLC9A1P19634 815 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 ATXN3P54252 364 aaPredicted RBP14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 SLC14A1Q13336 389 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 ARID5BQ14865 1188 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 CAMK4Q16566 473 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 FNDC3BQ53EP0 1204 aaKnown RBP14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 MS4A13Q5J8X5 152 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 MBLAC2Q68D91 279 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 DENND1BQ6P3S1 775 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 RFWD3Q6PCD5 774 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 TAC4Q86UU9 113 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 MFN1Q8IWA4 741 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 WFDC5Q8TCV5 224 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 PRICKLE1Q96MT3 831 aaPredicted RBP14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 ZDHHC5Q9C0B5 715 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 LHX5Q9H2C1 402 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 SLC32A1Q9H598 525 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 NAALADL1Q9UQQ1 740 aa14.09□□□□□ -0.15
GTF3C6-201ENST00000329970 GOLGA6L7A0A1B0GV03 622 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 METTL12A8MUP2 240 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 OPHN1O60890 802 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 GJB3O75712 270 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 ASLP04424 464 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 POLR2EP19388 210 aaKnown RBP14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 KCNA4P22459 653 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 PON1P27169 355 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 CD70P32970 193 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 YWHAZP63104 245 aaKnown RBP14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 ZNF252P-AS1Q0IIN9 211 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 MTA1Q13330 715 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 PDCLQ13371 301 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 HNRNPDQ14103 355 aaKnown RBP14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 MAN2A1Q16706 1144 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 SYPL2Q5VXT5 272 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 FAM114A1Q8IWE2 563 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 HDDC3Q8N4P3 179 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 DEFB119Q8N690 84 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 MYO19Q96H55 970 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 BTN2A3PQ96KV6 586 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 CRACR2AQ9BSW2 395 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 CLSTN2Q9H4D0 955 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 SUN2Q9UH99 717 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 WASF3Q9UPY6 502 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 TMEM131Q92545 1883 aa14.08□□□□□ -0.16
GTF3C6-201ENST00000329970 DOCK4Q8N1I0 1966 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 A0A1B0GTW7 788 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 CAPN9O14815 690 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 GIPC1O14908 333 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 TRUB2O95900 331 aaKnown RBP14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 APOEP02649 317 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 HLA-EP13747 358 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 ERCC5P28715 1186 aaPredicted RBP14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 MAPK8P45983 427 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 UAP1L1Q3KQV9 507 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 PLEKHG6Q3KR16 790 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 CT47A1Q5JQC4 288 aaPredicted RBP14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 DCAF12L1Q5VU92 463 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 GJB7Q6PEY0 223 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 RGL4Q8IZJ4 473 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 WDTC1Q8N5D0 677 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 MINDY1Q8N5J2 469 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 CYB5D2Q8WUJ1 264 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 ERLEC1Q96DZ1 483 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 SLC2A13Q96QE2 648 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 GPR174Q9BXC1 333 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 NUCKS1Q9H1E3 243 aaKnown RBP14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 SIX2Q9NPC8 291 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 OSGEPQ9NPF4 335 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 PRSS16Q9NQE7 514 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 DACH1Q9UI36 760 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 SCML1Q9UN30 329 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 ITIH6Q6UXX5 1313 aa14.07□□□□□ -0.16
GTF3C6-201ENST00000329970 MEI4A8MW99 385 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 HSF2BPO75031 334 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 LUC7L3O95232 432 aaKnown RBP14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 SRPRAP08240 638 aaKnown RBP14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 SLC2A3P11169 496 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 MTIF2P46199 727 aaKnown RBP14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 SNX16P57768 344 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 RPS24P62847 133 aaKnown RBP14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 PTK2Q05397 1052 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 SLC12A1Q13621 1099 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 CDH18Q13634 790 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 ARHGAP44Q17R89 818 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 DCAF6Q58WW2 860 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 EFHC1Q5JVL4 640 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 TTC39BQ5VTQ0 682 aaPredicted RBP14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 CLEC17AQ6ZS10 378 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 CCDC117Q8IWD4 279 aaPredicted RBP14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 ATP6V0D2Q8N8Y2 350 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 DEFB124Q8NES8 71 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 C1orf216Q8TAB5 229 aa14.06□□□□□ -0.16
GTF3C6-201ENST00000329970 MYEOVQ96EZ4 313 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms