RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 DPPA5A6NC42 116 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 TKTP29401 623 aaKnown RBP14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 SLC1A6P48664 564 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 DCAF4L1Q3SXM0 396 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 NT5DC4Q86YG4 428 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 C10orf107Q8IVU9 208 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 TNS4Q8IZW8 715 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 RNF139Q8WU17 664 aa14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 CCDC124Q96CT7 223 aaKnown RBP14.45□□□□□ -0.1
ATP2C1-201ENST00000328560 ATP9BO43861 1147 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 KLC1Q07866 573 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 RIPOR1Q6ZS17 1223 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 ZDHHC17Q8IUH5 632 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 EFCAB3Q8N7B9 438 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 OR52K1Q8NGK4 314 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 SHKBP1Q8TBC3 707 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 ZNF333Q96JL9 665 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 PPP1R36Q96LQ0 422 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 FERMT1Q9BQL6 677 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 MOCS1Q9NZB8 636 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 DLGAP2Q9P1A6 1054 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 APOBEC2Q9Y235 224 aaKnown RBP14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 MRPL42Q9Y6G3 142 aaKnown RBP14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 HUS1O60921 280 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 MAGEA3P43357 314 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 MAGEA6P43360 314 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 LRRC36Q1X8D7 754 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 NOTUMQ6P988 496 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 C4orf22Q6V702 233 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 CTU1Q7Z7A3 348 aaKnown RBP14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 PPP4R1Q8TF05 950 aa14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 G3BP2Q9UN86 482 aaKnown RBP14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 RPL26L1Q9UNX3 145 aaKnown RBP14.44□□□□□ -0.1
ATP2C1-201ENST00000328560 ENO4A6NNW6 628 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 GOLGA8TH3BQL2 631 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 MAP3K7O43318 606 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 USP1O94782 785 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 STAU1O95793 577 aaKnown RBP14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 ITGA2BP08514 1039 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 GSTA2P09210 222 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 SMPD1P17405 629 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 TUBP50607 506 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 PEX6Q13608 980 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 ITGA9Q13797 1035 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 ZRSR2Q15696 482 aaKnown RBP14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 PRAMEF19Q5SWL8 479 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 SYPL2Q5VXT5 272 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 MAMDC4Q6UXC1 1216 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 UNC93AQ86WB7 457 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 ULK2Q8IYT8 1036 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 KBTBD7Q8WVZ9 684 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 ZNF669Q96BR6 464 aaPredicted RBP14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 TMEM216Q9P0N5 145 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 SMIM28A0A1B0GU29 152 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 CAPN14A8MX76 684 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 BEST1O76090 585 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 SKIP12755 728 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 FDFT1P37268 417 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 MATKP42679 507 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 SIX6OS1Q8N1H7 587 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 PIWIL2Q8TC59 973 aaKnown RBP14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 DNAJB3Q8WWF6 145 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 UBP1Q9NZI7 540 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 UBQLN1Q9UMX0 589 aaKnown RBP14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 ZMPSTE24O75844 475 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 CYP2C9P11712 490 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 DEUP1Q05D60 604 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 EFHC1Q5JVL4 640 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 ARHGAP17Q68EM7 881 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 ZNF410Q86VK4 478 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 ZNF567Q8N184 647 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 LRRC52Q8N7C0 313 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 SLC7A14Q8TBB6 771 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 EMCNQ9ULC0 261 aa14.43□□□□□ -0.1
ATP2C1-201ENST00000328560 EEF2KO00418 725 aaKnown RBP14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 GLRA3O75311 464 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 TEDDM1Q5T9Z0 273 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 KYAT3Q6YP21 454 aaKnown RBP14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 HFE2Q6ZVN8 426 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 LENG1Q96BZ8 264 aaPredicted RBP14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 MOCOSQ96EN8 888 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 ABHD16BQ9H3Z7 469 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 CAB39LQ9H9S4 337 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 PLEKHA5Q9HAU0 1116 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 MAN1C1Q9NR34 630 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 SLC7A8Q9UHI5 535 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 CORO1CQ9ULV4 474 aaPredicted RBP14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 FZD10Q9ULW2 581 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 TIMM13Q9Y5L4 95 aaPredicted RBP14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 RRN3P2A6NIE6 340 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 XPOTO43592 962 aaKnown RBP14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 PLIN3O60664 434 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 SNNO75324 88 aaPredicted RBP14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 PDE5AO76074 875 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 SNAI1O95863 264 aaPredicted RBP14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 TPH1P17752 444 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 IGFBP6P24592 240 aaPredicted RBP14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 GJA5P36382 358 aa14.42□□□□□ -0.1
ATP2C1-201ENST00000328560 MAP3K7CLP57077 242 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms