RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CLEC1BQ9P126 229 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 STOML2Q9UJZ1 356 aa10.58□□□□□ -0.72
VIPAS39-201ENST00000327028 IGLV3-10A0A075B6K4 115 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 EFCAB8A8MWE9 144 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 DCLK1O15075 740 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 DAPK3O43293 454 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 GREM1O60565 184 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 KLKB1P03952 638 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 FSHRP23945 695 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 ZXDBP98169 803 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 AUHQ13825 339 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 RAP1GAP2Q684P5 730 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 NCBP2-AS2Q69YL0 99 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 C14orf80Q86SX3 495 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 DENND1CQ8IV53 801 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 ING5Q8WYH8 240 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 LRCH3Q96II8 777 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 GAS2L1Q99501 681 aaPredicted RBP10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 SLITRK6Q9H5Y7 841 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 LRRC19Q9H756 370 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 PPARGC1AQ9UBK2 798 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 LSM7Q9UK45 103 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 AGO1Q9UL18 857 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 DENND4AQ7Z401 1863 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 DOCK4Q8N1I0 1966 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 TBX10O75333 385 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 TCF3P15923 654 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 TACR2P21452 398 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 EPHB2P29323 1055 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 WEE1P30291 646 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 CHRNA3P32297 505 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 CCNG2Q16589 344 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 FAM133BQ5BKY9 247 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 LRRC31Q6UY01 552 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 NOA1Q8NC60 698 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 C1orf54Q8WWF1 131 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 ATG4AQ8WYN0 398 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 DDX50Q9BQ39 737 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 APOL5Q9BWW9 433 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 ADAM7Q9H2U9 754 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 ETNK2Q9NVF9 386 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 STIM2Q9P246 746 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 CFAP97Q9P2B7 532 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 ZNF510Q9Y2H8 683 aa10.57□□□□□ -0.72
VIPAS39-201ENST00000327028 F5H5T6 163 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 LEFTY2O00292 366 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 PECAM1P16284 738 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 ERCC2P18074 760 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 IGFBP4P22692 258 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 FNTAP49354 379 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 TUBB4BP68371 445 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 OTUD4Q01804 1114 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 USP4Q13107 963 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 PAFAH1B3Q15102 231 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 NOMO1Q15155 1222 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 RWDD4Q6NW29 188 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 FBXL22Q6P050 247 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 HTR3DQ70Z44 454 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 ACTL9Q8TC94 416 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 SH3RF2Q8TEC5 729 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 USP13Q92995 863 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 MAGOHBQ96A72 148 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 HAUS1Q96CS2 278 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 RUNDC3BQ96NL0 473 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 KRT12Q99456 494 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 DDX47Q9H0S4 455 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 SMG9Q9H0W8 520 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 S1PR5Q9H228 398 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 CATSPERBQ9H7T0 1116 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 CLDND1Q9NY35 253 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 VANGL2Q9ULK5 521 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 SH3BP1Q9Y3L3 701 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 CDH23Q9H251 3354 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 GOLGA6L7A0A1B0GV03 622 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 DRGXA6NNA5 263 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 WASH4PA8MWX3 477 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 LIASO43766 372 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 RHOQP17081 205 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 SLC6A4P31645 630 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 NR2C2P49116 596 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 C5orf22Q49AR2 442 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 TEX35Q5T0J7 233 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 ADGRF1Q5T601 910 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 CES5AQ6NT32 575 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 DRICH1Q6PGQ1 229 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 C1orf228Q6PIY5 440 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 TMCO3Q6UWJ1 677 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 NPNTQ6UXI9 565 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 NPAS3Q8IXF0 933 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 KLHL7Q8IXQ5 586 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 FAM217AQ8IXS0 508 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 MYRIPQ8NFW9 859 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 SLC35B2Q8TB61 432 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 P3H4Q92791 437 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 NKD2Q969F2 451 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 PABPC5Q96DU9 382 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 KIF9Q9HAQ2 790 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 TDP1Q9NUW8 608 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 MFHAS1Q9Y4C4 1052 aa10.56□□□□□ -0.72
VIPAS39-201ENST00000327028 E2F8A0AVK6 867 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms