RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ZNF354CQ86Y25 554 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 HPS6Q86YV9 775 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 GCOM2Q9BZD3 368 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 C20orf96Q9NUD7 363 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 GPRC5DQ9NZD1 345 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 TLK1Q9UKI8 766 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 A0A0A0MRY4 1105 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 MAGEA13PA6NCF6 341 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 MAP3K13O43283 966 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 RECQL4O94761 1208 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 ETS2P15036 469 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 PROZP22891 400 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 CRHR1P34998 444 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 NUDT2P50583 147 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 AEBP2Q6ZN18 517 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 SPATA13Q96N96 652 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 TASP1Q9H6P5 420 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 KIAA1257Q9ULG3 409 aa13.24□□□□□ -0.29
HMGCS1-201ENST00000325110 DNAJC6O75061 913 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 SERPINE1P05121 402 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 SERPINA6P08185 405 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 VAV1P15498 845 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 PRKCHP24723 683 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 CYP4V2Q6ZWL3 525 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 RNF135Q8IUD6 432 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 PIP4K2CQ8TBX8 421 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 RNF139Q8WU17 664 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 LRRC39Q96DD0 335 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 CELF6Q96J87 481 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 ZMAT2Q96NC0 199 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 SIRPGQ9P1W8 387 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 CNTN3Q9P232 1028 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 BRWD3Q6RI45 1802 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 PHGDHO43175 533 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 TSPAN1O60635 241 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 SIN3BO75182 1162 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 PFKMP08237 780 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 NDUFV1P49821 464 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 PAPOLAP51003 745 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 BCAT1P54687 386 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 MCCD1P59942 119 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 BST2Q10589 180 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 TBL3Q12788 808 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 MMEL1Q495T6 779 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 PIGZQ86VD9 579 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 SPATA6LQ8N4H0 392 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 APPL2Q8NEU8 664 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 USP13Q92995 863 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 OXCT2Q9BYC2 517 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 WDR55Q9H6Y2 383 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 TLE6Q9H808 572 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 ZNF180Q9UJW8 692 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 PLIN3O60664 434 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 TRPA1O75762 1119 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 KLHL2O95198 593 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 ALDOAP04075 364 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 SRGAP2BP0DMP2 458 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 GABRB2P47870 512 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 TPI1P60174 286 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 PDCD2Q16342 344 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 TAZQ16635 292 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 FBXO47Q5MNV8 452 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 DCLK2Q8N568 766 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 EDEM1Q92611 657 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 AGAP2Q99490 1192 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 KRT82Q9NSB4 513 aa13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 IARS2Q9NSE4 1012 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 RPL26L1Q9UNX3 145 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-201ENST00000325110 A0A096LPK6 155 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 PPP1R12AO14974 1030 aaPredicted RBP13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 SLC25A27O95847 323 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 SLC26A2P50443 739 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 MAP3K7CLP57077 242 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 MED21Q13503 144 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 SEPT6Q14141 434 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 GRIK4Q16099 956 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 ZNF484Q5JVG2 852 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 SLC9A4Q6AI14 798 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 IGKV6-21A0A0C4DH24 114 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 FAM159BA6NKW6 160 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 RAG1P15918 1043 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 EDNRBP24530 442 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 CCNG1P51959 295 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 RBBP5Q15291 538 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 NCBP2-AS2Q69YL0 99 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 KYAT3Q6YP21 454 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 NET1Q7Z628 596 aaPredicted RBP13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 PHTF2Q8N3S3 785 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 MFSD3Q96ES6 412 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 CERS2Q96G23 380 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 ARHGEF4Q9NR80 690 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 SNX15Q9NRS6 342 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 HMX2A2RU54 273 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 AP1G2O75843 785 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 FDFT1P37268 417 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 GP5P40197 560 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 PKNOX1P55347 436 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 WASHC5Q12768 1159 aa13.22□□□□□ -0.29
HMGCS1-201ENST00000325110 BIRC2Q13490 618 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms