RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TMPRSS6Q8IU80 811 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 NUAK2Q9H093 628 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.07□□□□□ -1.12
CIITA-201ENST00000324288 ZMYM5Q9UJ78 669 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 DAGLAQ9Y4D2 1042 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 ROBO2Q9HCK4 1378 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 PLA2G6O60733 806 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 TMCC2O75069 709 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 RPS6KA4O75676 772 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 QPRTQ15274 297 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 GPR107Q5VW38 600 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 EGFLAMQ63HQ2 1017 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 LINC00523Q86TU6 105 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 FBXO30Q8TB52 745 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 MTFMTQ96DP5 389 aaKnown RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 CLPBQ9H078 707 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 MID1IP1Q9NPA3 183 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 PLA2G4CQ9UP65 541 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 CASTOR2A6NHX0 329 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 AP3D1O14617 1153 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 PGM3O95394 542 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 JCHAINP01591 159 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 GRK4P32298 578 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 SOX10P56693 466 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 OSCP1Q8WVF1 389 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 FSBPO95073 299 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 IL12AP29459 219 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 KRT20P35900 424 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 RPL21P46778 160 aaKnown RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 TTMPQ5BVD1 217 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 RNF145Q96MT1 663 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 TMEM121Q9BTD3 319 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 CIPCQ9C0C6 399 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 MMADHCQ9H3L0 296 aaPredicted RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 WDR35Q9P2L0 1181 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 DCXO43602 365 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 S100A6P06703 90 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 ENO2P09104 434 aaPredicted RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 PDHA2P29803 388 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 SERPINH1P50454 418 aaKnown RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 C1DQ13901 141 aaKnown RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 TAF13Q15543 124 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 NEK5Q6P3R8 708 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 ZCCHC23Q6ZST2 131 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 KIAA0408Q6ZU52 694 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 CLIP3Q96DZ5 547 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 FAM84BQ96KN1 310 aaPredicted RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 MTMR4Q9NYA4 1195 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 HBS1LQ9Y450 684 aaKnown RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 ATG2BQ96BY7 2078 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 H3BN98 237 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 TNNI3P19429 210 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 ACO1P21399 889 aaKnown RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 CCDC80Q76M96 950 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 DEFB128Q7Z7B8 93 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 HIPK1Q86Z02 1210 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 POMGNT2Q8NAT1 580 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 MAGEE2Q8TD90 523 aaPredicted RBP8.07□□□□□ -1.12
CIITA-201ENST00000324288 CDRT15Q96T59 188 aa8.07□□□□□ -1.12
CIITA-201ENST00000324288 CKMP06732 381 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 CYP2C8P10632 490 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 GHRP10912 638 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 MYL4P12829 197 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 ATN1P54259 1190 aaPredicted RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 ROR2Q01974 943 aaKnown RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 RGS21Q2M5E4 152 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 THOC7Q6I9Y2 204 aaKnown RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 PARK7Q99497 189 aaKnown RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 SPACA6W5XKT8 324 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 MYL12BO14950 172 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 PSMA3P25788 255 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 MCL1Q07820 350 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 MYBPC2Q14324 1141 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 GALNT18Q6P9A2 607 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 SCIMPQ6UWF3 145 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 MYO1HQ8N1T3 1032 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 ITFG1Q8TB96 612 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 MAML3Q96JK9 1138 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 RMND5AQ9H871 391 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 ZNF609O15014 1411 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 NPHP4O75161 1426 aaPredicted RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 SCAMP3O14828 347 aaKnown RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 PLOD3O60568 738 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 CELF2O95319 508 aaKnown RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 ATF4P18848 351 aaPredicted RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 GSTM5P46439 218 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 UBAP2LQ14157 1087 aaKnown RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 XKR3Q5GH77 459 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 TFAP2DQ7Z6R9 452 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 FBXO16Q8IX29 292 aaPredicted RBP8.06□□□□□ -1.12
CIITA-201ENST00000324288 C9orf16Q9BUW7 83 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 ADI1Q9BV57 179 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 A0A1W2PQ72 361 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 ACADSBP45954 432 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 SLC25A3Q00325 362 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 ZNF621Q6ZSS3 439 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 CAMKK1Q8N5S9 505 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 NSMCE2Q96MF7 247 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 AFF2P51816 1311 aa8.06□□□□□ -1.12
CIITA-201ENST00000324288 SYNCRIPO60506 623 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms