RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 CAMK2GQ13555 558 aaPredicted RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 PARP6Q2NL67 630 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 MTG1Q9BT17 334 aaPredicted RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 POPDC2Q9HBU9 364 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 PRR23D1E9PI22 279 aaPredicted RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 MEIS2O14770 477 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 ENDOD1O94919 500 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 PRR23D2P0DMB1 279 aaPredicted RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 SKIV2L2P42285 1042 aaKnown RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 CCT8P50990 548 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 BLVRAP53004 296 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 OVOS1Q6IE37 1185 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 FAM183BPQ6ZVS7 135 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 ILDR2Q71H61 639 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 APBA2Q99767 749 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 CCDC154A6NI56 674 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 ERI2A8K979 691 aaKnown RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 CBX6O95503 412 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 STAU1O95793 577 aaKnown RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 TRAF2Q12933 501 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 CDC16Q13042 620 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 TRIP4Q15650 581 aaPredicted RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 TRIM16LQ309B1 348 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 RNF43Q68DV7 783 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 ZCCHC23Q6ZST2 131 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 HOMEZQ8IX15 550 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 MRPS31Q92665 395 aaKnown RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 PIF1Q9H611 641 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 ADRA1DP25100 572 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 BFSP2Q13515 415 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 KCNT2Q6UVM3 1135 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 PCSK9Q8NBP7 692 aaKnown RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 OR6Y1Q8NGX8 325 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 NMD3Q96D46 503 aaKnown RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 SERPINB11Q96P15 392 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 CAB39Q9Y376 341 aaPredicted RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 GUCA1CO95843 209 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 ABHD2P08910 425 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 FASP25445 335 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 SCNN1BP51168 640 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 NCKAP1LP55160 1127 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 ZNF284Q2VY69 593 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 TMEM26Q6ZUK4 368 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 FAM71AQ8IYT1 594 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 LZTR1Q8N653 840 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 STK32AQ8WU08 396 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 MID1IP1Q9NPA3 183 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 PAIP2BQ9ULR5 123 aaKnown RBP11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 DOLKQ9UPQ8 538 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 C15orf41Q9Y2V0 281 aa11.15□□□□□ -0.63
SNRNP200-201ENST00000323853 IFNA14P01570 189 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 HALP42357 657 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 FAM98BQ52LJ0 330 aaKnown RBP11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 SLC45A4Q5BKX6 768 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 PLEKHM3Q6ZWE6 761 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 FBXO39Q8N4B4 442 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 FIG4Q92562 907 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 KAT5Q92993 513 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 FAM120BQ96EK7 910 aaKnown RBP11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 BBS2Q9BXC9 721 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 USE1Q9NZ43 259 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 ARMCX1Q9P291 453 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 CPA4Q9UI42 421 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 NFASCO94856 1347 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 MGAT4DA6NG13 374 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 SNTNA6NMZ2 147 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 WNT10BO00744 389 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 TFAP2DQ7Z6R9 452 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 PGBD3Q8N328 593 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 LRRC39Q96DD0 335 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 CDHR5Q9HBB8 845 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 CYP39A1Q9NYL5 469 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 NDUFAF1Q9Y375 327 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 SRRM3A6NNA2 597 aaPredicted RBP11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 YBX3P16989 372 aaKnown RBP eCLIP11.14□□□□□ -0.632e-8■■□□□ 11.6
SNRNP200-201ENST00000323853 SNX30Q5VWJ9 437 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 ZNF470Q6ECI4 717 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 SEMA4DQ92854 862 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 LRRC19Q9H756 370 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 DMAP1Q9NPF5 467 aaPredicted RBP11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 ENTPD7Q9NQZ7 604 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 UBIAD1Q9Y5Z9 338 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 RAMP2O60895 175 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 TSHRP16473 764 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 CHKAP35790 457 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 RHBDL3P58872 404 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 AUHQ13825 339 aaKnown RBP11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 TAF2Q6P1X5 1199 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 ADAM32Q8TC27 787 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 OSCP1Q8WVF1 389 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 SEPT8Q92599 483 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 TMEM169Q96HH4 297 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 RHBDL2Q9NX52 303 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 KANSL3Q9P2N6 904 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 PNMA8BQ9ULN7 279 aaPredicted RBP11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 TMCC3Q9ULS5 477 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 ACTL7BQ9Y614 415 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 RAD51BO15315 384 aa11.14□□□□□ -0.63
SNRNP200-201ENST00000323853 LZTS3O60299 673 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms