RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 FAAP100Q0VG06 881 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 UPP1Q16831 310 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 SNRNP27Q8WVK2 155 aaKnown RBP12.36□□□□□ -0.43
NCL-201ENST00000322723 PTPRN2Q92932 1015 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 PITPNM3Q9BZ71 974 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 LRMDAQ9H2I8 198 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 MIOSQ9NXC5 875 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 KLK14Q9P0G3 267 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 SIRPGQ9P1W8 387 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 LNPEPQ9UIQ6 1025 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 ADAMTS4O75173 837 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 ADRA1DP25100 572 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 CST5P28325 142 aaPredicted RBP12.36□□□□□ -0.43
NCL-201ENST00000322723 HOXC13P31276 330 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 COG7P83436 770 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 ADIGQ0VDE8 80 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 PTK7Q13308 1070 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 PARP6Q2NL67 630 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 CES4AQ5XG92 561 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 PALM2Q8IXS6 379 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 PYROXD2Q8N2H3 581 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 GSDMBQ8TAX9 411 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 CCDC110Q8TBZ0 833 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 HTR3CQ8WXA8 447 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 RAB3IPQ96QF0 476 aaPredicted RBP12.36□□□□□ -0.43
NCL-201ENST00000322723 CNGB3Q9NQW8 809 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.36□□□□□ -0.433e-29■□□□□ 9.3
NCL-201ENST00000322723 HUS1O60921 280 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 NQO1P15559 274 aaKnown RBP12.36□□□□□ -0.43
NCL-201ENST00000322723 BEX3Q00994 111 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 AGMOQ6ZNB7 445 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 KLHDC9Q8NEP7 349 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 DTX3LQ8TDB6 740 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 MTG1Q9BT17 334 aaPredicted RBP12.36□□□□□ -0.43
NCL-201ENST00000322723 PIGVQ9NUD9 493 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 FAM105AQ9NUU6 356 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 RRN3Q9NYV6 651 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 CDH9Q9ULB4 789 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 TANC1Q9C0D5 1861 aa12.36□□□□□ -0.43
NCL-201ENST00000322723 NRP1O14786 923 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 PYGLP06737 847 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 CSH1P0DML2 217 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 CSH2P0DML3 217 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 LHX1P48742 406 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 ANKRD20A2Q5SQ80 823 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 ANKRD20A1Q5TYW2 823 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 HHATQ5VTY9 493 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 ANKRD20A3Q5VUR7 823 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 MPP5Q8N3R9 675 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.35□□□□□ -0.43
NCL-201ENST00000322723 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.35□□□□□ -0.43
NCL-201ENST00000322723 RNF139Q8WU17 664 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 UTP4Q969X6 686 aaKnown RBP12.35□□□□□ -0.43
NCL-201ENST00000322723 TTC17Q96AE7 1141 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 SLCO1B3Q9NPD5 702 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 FBXW11Q9UKB1 542 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 CDY2AQ9Y6F7 541 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 MEIS3P2A8K0S8 358 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 CYB561D2O14569 222 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 SNNO75324 88 aaPredicted RBP12.35□□□□□ -0.43
NCL-201ENST00000322723 PRKCGP05129 697 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 PDGFRBP09619 1106 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 LCP1P13796 627 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 DESP17661 470 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 KRT15P19012 456 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 CNTFP26441 200 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 SERPINB4P48594 390 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 CACNA2D1P54289 1103 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 ZNF33AQ06730 810 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 DNAJC3Q13217 504 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 WSCD1Q658N2 575 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 GDF6Q6KF10 455 aaPredicted RBP12.35□□□□□ -0.43
NCL-201ENST00000322723 FAM35AQ86V20 835 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 OR6Y1Q8NGX8 325 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 TFB1MQ8WVM0 346 aaKnown RBP12.35□□□□□ -0.43
NCL-201ENST00000322723 INPP5DQ92835 1189 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 SKA1Q96BD8 255 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
NCL-201ENST00000322723 CHCHD3Q9NX63 227 aaKnown RBP12.35□□□□□ -0.43
NCL-201ENST00000322723 MYL3P08590 195 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 CA4P22748 312 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 RCN2Q14257 317 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 C6orf163Q5TEZ5 329 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 SYPL2Q5VXT5 272 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 CDHR3Q6ZTQ4 885 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 GPRIN1Q7Z2K8 1008 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 DHX35Q9H5Z1 703 aaKnown RBP12.35□□□□□ -0.43
NCL-201ENST00000322723 PLLPQ9Y342 182 aa12.35□□□□□ -0.43
NCL-201ENST00000322723 AMPD1P23109 780 aa12.34□□□□□ -0.43
NCL-201ENST00000322723 CXCR3P49682 368 aa12.34□□□□□ -0.43
NCL-201ENST00000322723 SULT1E1P49888 294 aa12.34□□□□□ -0.43
NCL-201ENST00000322723 PPIDQ08752 370 aaKnown RBP12.34□□□□□ -0.43
NCL-201ENST00000322723 HSF5Q4G112 596 aaPredicted RBP12.34□□□□□ -0.43
NCL-201ENST00000322723 HFE2Q6ZVN8 426 aa12.34□□□□□ -0.43
NCL-201ENST00000322723 CCNJLQ8IV13 435 aa12.34□□□□□ -0.43
NCL-201ENST00000322723 SLC7A6OSQ96CW6 309 aaPredicted RBP12.34□□□□□ -0.43
NCL-201ENST00000322723 ZNF408Q9H9D4 720 aa12.34□□□□□ -0.43
NCL-201ENST00000322723 SLC4A7Q9Y6M7 1214 aa12.34□□□□□ -0.43
NCL-201ENST00000322723 CRHR1P34998 444 aa12.34□□□□□ -0.43
NCL-201ENST00000322723 INHBEP58166 350 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms