RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.98■■□□□ 1.27
PNKP-201ENST00000322344 FAM237BA0A1B0GVD1 139 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 FCHO1O14526 889 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 CAPN9O14815 690 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 NCAM2O15394 837 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 GLRA3O75311 464 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 SNNO75324 88 aaPredicted RBP22.98■■□□□ 1.27
PNKP-201ENST00000322344 LMNAP02545 664 aaKnown RBP22.98■■□□□ 1.27
PNKP-201ENST00000322344 PSMB4P28070 264 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 ADRA1BP35368 520 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 MAP3K7CLP57077 242 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 SESN2P58004 480 aaPredicted RBP22.98■■□□□ 1.27
PNKP-201ENST00000322344 CRYMQ14894 314 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 TAF2Q6P1X5 1199 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 ZNF567Q8N184 647 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 ARNTL2Q8WYA1 636 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 ATP2A3Q93084 1043 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 TSPYL2Q9H2G4 693 aaPredicted RBP22.98■■□□□ 1.27
PNKP-201ENST00000322344 CNGB3Q9NQW8 809 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 RRN3Q9NYV6 651 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 FLRT1Q9NZU1 646 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 SEPT10Q9P0V9 454 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 CPA4Q9UI42 421 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 PEX11AO75192 247 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 IBSPP21815 317 aaPredicted RBP22.98■■□□□ 1.27
PNKP-201ENST00000322344 DAOAP59103 153 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 CFAP61Q8NHU2 1237 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 UPF1Q92900 1129 aaKnown RBP eCLIP22.98■■□□□ 1.27
PNKP-201ENST00000322344 SENP8Q96LD8 212 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 BRD8Q9H0E9 1235 aa22.98■■□□□ 1.27
PNKP-201ENST00000322344 FBXO6Q9NRD1 293 aaPredicted RBP22.98■■□□□ 1.27
PNKP-201ENST00000322344 ELF1P32519 619 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 ZNF135P52742 658 aaPredicted RBP22.97■■□□□ 1.27
PNKP-201ENST00000322344 STX3Q13277 289 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 INTS6LQ5JSJ4 861 aaKnown RBP22.97■■□□□ 1.27
PNKP-201ENST00000322344 SPANXN3Q5MJ09 141 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 SLC7A14Q8TBB6 771 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 PGBD4Q96DM1 585 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 PGAP3Q96FM1 320 aaPredicted RBP22.97■■□□□ 1.27
PNKP-201ENST00000322344 SYT15Q9BQS2 421 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 SIKE1Q9BRV8 207 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 ULBP1Q9BZM6 244 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 CRTAC1Q9NQ79 661 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 XPNPEP3Q9NQH7 507 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 TMPRSS4Q9NRS4 437 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 DCDC2Q9UHG0 476 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 PTCH2Q9Y6C5 1203 aa22.97■■□□□ 1.27
PNKP-201ENST00000322344 DIAPH2O60879 1101 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 POLBP06746 335 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 ESRRAP11474 423 aaPredicted RBP22.96■■□□□ 1.27
PNKP-201ENST00000322344 KIAA0319Q5VV43 1072 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 HFE2Q6ZVN8 426 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 ARID3BQ8IVW6 561 aaPredicted RBP22.96■■□□□ 1.27
PNKP-201ENST00000322344 ENDOVQ8N8Q3 282 aaKnown RBP22.96■■□□□ 1.27
PNKP-201ENST00000322344 MIPEPQ99797 713 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 CADM1Q9BY67 442 aaKnown RBP22.96■■□□□ 1.27
PNKP-201ENST00000322344 THAP1Q9NVV9 213 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 F5H423 210 aaPredicted RBP22.96■■□□□ 1.27
PNKP-201ENST00000322344 NRP1O14786 923 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 GYG2O15488 501 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 MTSS1O43312 755 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 AP1G2O75843 785 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 FYNP06241 537 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 BEX3Q00994 111 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 SEMA3BQ13214 749 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 INSCQ1MX18 579 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 ARL13BQ3SXY8 428 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 PAXIP1Q6ZW49 1069 aaPredicted RBP22.96■■□□□ 1.27
PNKP-201ENST00000322344 PID1Q7Z2X4 250 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 FAM35AQ86V20 835 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 ZFP42Q96MM3 310 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 SYBUQ9NX95 663 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 FBXW11Q9UKB1 542 aa22.96■■□□□ 1.27
PNKP-201ENST00000322344 CCDC195A0A1B0GUA6 201 aa22.95■■□□□ 1.26
PNKP-201ENST00000322344 M0QZ92 97 aa22.95■■□□□ 1.26
PNKP-201ENST00000322344 GSC2O15499 205 aa22.95■■□□□ 1.26
PNKP-201ENST00000322344 ERCC2P18074 760 aa22.95■■□□□ 1.26
PNKP-201ENST00000322344 GARSP41250 739 aaKnown RBP22.95■■□□□ 1.26
PNKP-201ENST00000322344 TPI1P60174 286 aa22.95■■□□□ 1.26
PNKP-201ENST00000322344 CRADDP78560 199 aa22.95■■□□□ 1.26
PNKP-201ENST00000322344 RAB41Q5JT25 222 aa22.95■■□□□ 1.26
PNKP-201ENST00000322344 MMADHCQ9H3L0 296 aaPredicted RBP22.95■■□□□ 1.26
PNKP-201ENST00000322344 WDR6Q9NNW5 1121 aaKnown RBP22.95■■□□□ 1.26
PNKP-201ENST00000322344 KLHL8Q9P2G9 620 aaPredicted RBP22.95■■□□□ 1.26
PNKP-201ENST00000322344 TSC2P49815 1807 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 F9P00740 461 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 MRPS6P82932 125 aaKnown RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 FRG1Q14331 258 aaKnown RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 TBCCQ15814 346 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 FSCN1Q16658 493 aaKnown RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 RASSF3Q86WH2 238 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 UNC5BQ8IZJ1 945 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 SMC1BQ8NDV3 1235 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 PPP1R14CQ8TAE6 165 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 NUDCD1Q96RS6 583 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 MYCBPQ99417 103 aaPredicted RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 SMOQ99835 787 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 NMUR2Q9GZQ4 415 aa22.94■■□□□ 1.26
PNKP-201ENST00000322344 DENND2DQ9H6A0 471 aaPredicted RBP22.94■■□□□ 1.26
PNKP-201ENST00000322344 TXNDC16Q9P2K2 825 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms