RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TTLL4Q14679 1199 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 EFHC1Q5JVL4 640 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 DPY19L2Q6NUT2 758 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 SLC30A9Q6PML9 568 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 STRADAQ7RTN6 431 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 PSTKQ8IV42 348 aaKnown RBP8.95□□□□□ -0.98
CLK1-201ENST00000321356 LRRC52Q8N7C0 313 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 ANKRD52Q8NB46 1076 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 COLGALT1Q8NBJ5 622 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 GSTCDQ8NEC7 633 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 PPP1R14CQ8TAE6 165 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 SHKBP1Q8TBC3 707 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 ACTRT2Q8TDY3 377 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 ATP2A3Q93084 1043 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 ZMAT2Q96NC0 199 aaKnown RBP8.95□□□□□ -0.98
CLK1-201ENST00000321356 PPP1R16BQ96T49 567 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 LGMNQ99538 433 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 MMP19Q99542 508 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 CXCL16Q9H2A7 254 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 S100A14Q9HCY8 104 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 COPG2Q9UBF2 871 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 RBPJLQ9UBG7 517 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 NR2E3Q9Y5X4 410 aa8.95□□□□□ -0.98
CLK1-201ENST00000321356 ZNF638Q14966 1978 aaKnown RBP8.95□□□□□ -0.98
CLK1-201ENST00000321356 RNF103O00237 685 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 MFSD11O43934 449 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 PIM1P11309 404 aaPredicted RBP8.94□□□□□ -0.98
CLK1-201ENST00000321356 GNAT1P11488 350 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 MGAT1P26572 445 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 PAPOLAP51003 745 aaKnown RBP8.94□□□□□ -0.98
CLK1-201ENST00000321356 BCAT1P54687 386 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 SLC25A3Q00325 362 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 KCTD2Q14681 263 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 DCAF4L1Q3SXM0 396 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 THEMIS2Q5TEJ8 643 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 CASC4Q6P4E1 433 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 RNF111Q6ZNA4 994 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 DHDDSQ86SQ9 333 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 C10orf107Q8IVU9 208 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 CRYBG2Q8N1P7 616 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 PYROXD2Q8N2H3 581 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 GALNT15Q8N3T1 639 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 CCDC33Q8N5R6 958 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 C7orf31Q8N865 590 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 ZFAND2BQ8WV99 257 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 JADE3Q92613 823 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 CLMNQ96JQ2 1002 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 SNX27Q96L92 541 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 TTC1Q99614 292 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 LPIN3Q9BQK8 851 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 FAM192AQ9GZU8 254 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 DPEP3Q9H4B8 488 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 PIDD1Q9HB75 910 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 PAPOLBQ9NRJ5 636 aaKnown RBP8.94□□□□□ -0.98
CLK1-201ENST00000321356 PNPOQ9NVS9 261 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 FZD10Q9ULW2 581 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 TSC2P49815 1807 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.94□□□□□ -0.98
CLK1-201ENST00000321356 USP1O94782 785 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 STK10O94804 968 aaKnown RBP8.94□□□□□ -0.98
CLK1-201ENST00000321356 RALBP11234 206 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 PRDX6P30041 224 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 GP5P40197 560 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 ARL4AP40617 200 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 ACADSBP45954 432 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 NUMBP49757 651 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 SESN2P58004 480 aaPredicted RBP8.94□□□□□ -0.98
CLK1-201ENST00000321356 ABCE1P61221 599 aaKnown RBP8.94□□□□□ -0.98
CLK1-201ENST00000321356 ROR2Q01974 943 aaKnown RBP8.94□□□□□ -0.98
CLK1-201ENST00000321356 DEUP1Q05D60 604 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 LAMC2Q13753 1193 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 CCNIQ14094 377 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 FRG1Q14331 258 aaKnown RBP8.94□□□□□ -0.98
CLK1-201ENST00000321356 Q3C1V9 767 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 OTUD1Q5VV17 481 aaPredicted RBP8.94□□□□□ -0.98
CLK1-201ENST00000321356 CWF19L1Q69YN2 538 aaKnown RBP8.94□□□□□ -0.98
CLK1-201ENST00000321356 MTHFD1LQ6UB35 978 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 MAMDC4Q6UXC1 1216 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 BNIPLQ7Z465 357 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 MFN1Q8IWA4 741 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 SLC25A41Q8N5S1 370 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 PPP4R1Q8TF05 950 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 KBTBD7Q8WVZ9 684 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 PPP2R3CQ969Q6 453 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 P2RY11Q96G91 374 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 HSFY1Q96LI6 401 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 CPNE1Q99829 537 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 SH3GL3Q99963 347 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 SYBUQ9NX95 663 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.94□□□□□ -0.98
CLK1-201ENST00000321356 TMEM216Q9P0N5 145 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 IGSF9Q9P2J2 1179 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 TUBGCP4Q9UGJ1 667 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 CDH22Q9UJ99 828 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 ADAM28Q9UKQ2 775 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 TBC1D30Q9Y2I9 924 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 CSADQ9Y600 493 aa8.94□□□□□ -0.98
CLK1-201ENST00000321356 ASB14A6NK59 587 aa8.93□□□□□ -0.98
CLK1-201ENST00000321356 CXCL11O14625 94 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms