RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 NOP53Q9NZM5 478 aaKnown RBP11.29□□□□□ -0.6
TOP3A-201ENST00000321105 FAM237BA0A1B0GVD1 139 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 ARL5CA6NH57 179 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 C2CD4BA6NLJ0 364 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 SNX2O60749 519 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 NDUFS3O75489 264 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 TBX18O95935 607 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 NUDT17P0C025 328 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 TAC1P20366 129 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 CDC25CP30307 473 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 TRIM32Q13049 653 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 DUSP4Q13115 394 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
TOP3A-201ENST00000321105 SLC1A5Q15758 541 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 DEFB115Q30KQ5 88 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 RNF219Q5W0B1 726 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-201ENST00000321105 ICE2Q659A1 982 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 TAPT1Q6NXT6 567 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 TRMT10BQ6PF06 316 aaKnown RBP11.28□□□□□ -0.6
TOP3A-201ENST00000321105 UNC5AQ6ZN44 842 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 ACAD11Q709F0 780 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 SPATA24Q86W54 205 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 RIBC1Q8N443 379 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-201ENST00000321105 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 LRRC52Q8N7C0 313 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 TMEM120AQ9BXJ8 343 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 DUSP16Q9BY84 665 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 XYLT2Q9H1B5 865 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 LHX5Q9H2C1 402 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 MAN1C1Q9NR34 630 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 FBXO6Q9NRD1 293 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-201ENST00000321105 ZDHHC18Q9NUE0 388 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 DONSONQ9NYP3 566 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 CYTH4Q9UIA0 394 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 SPAG6O75602 509 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 AXLP30530 894 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 FDFT1P37268 417 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 HTRA3P83110 453 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 MARC1Q5VT66 337 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 ZNF280DQ6N043 979 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 OTOP3Q7RTS5 596 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 TMC7Q7Z402 723 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 NT5DC4Q86YG4 428 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
TOP3A-201ENST00000321105 SPATA22Q8NHS9 363 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 RFWD2Q8NHY2 731 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 GANCQ8TET4 914 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 SH3GL2Q99962 352 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 PAAF1Q9BRP4 392 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 COLEC11Q9BWP8 271 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 VCX3BQ9H321 246 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 SLC24A2Q9UI40 661 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 V9GYQ6 96 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 MYH7BA7E2Y1 1941 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 ERI2A8K979 691 aaKnown RBP11.28□□□□□ -0.6
TOP3A-201ENST00000321105 SNX3O60493 162 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 UGT1A9O60656 530 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 ATG7O95352 703 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 MBL2P11226 248 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-201ENST00000321105 KCNJ2P63252 427 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 CDH18Q13634 790 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 NFE2Q16621 373 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-201ENST00000321105 TMCO4Q5TGY1 634 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 AZIN2Q96A70 460 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 APOL5Q9BWW9 433 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 UGT1A7Q9HAW7 530 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 UGT1A10Q9HAW8 530 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 UGT1A8Q9HAW9 530 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 MARCH2Q9P0N8 246 aa11.28□□□□□ -0.6
TOP3A-201ENST00000321105 NAV1Q8NEY1 1877 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 A0A096LPK6 155 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 ZMPSTE24O75844 475 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 SERPINB9P50453 376 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 AFF1P51825 1210 aaKnown RBP11.27□□□□□ -0.6
TOP3A-201ENST00000321105 PSMD5Q16401 504 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 TIGD5Q53EQ6 642 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 LCA5Q86VQ0 697 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 WDTC1Q8N5D0 677 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 DDI1Q8WTU0 396 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 SNX27Q96L92 541 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 FCRL2Q96LA5 508 aaPredicted RBP11.27□□□□□ -0.6
TOP3A-201ENST00000321105 YME1L1Q96TA2 773 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 NDNQ99608 321 aa11.27□□□□□ -0.6
TOP3A-201ENST00000321105 A0A0A0MRY4 1105 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 MEI4A8MW99 385 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 FBXO21O94952 628 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 YWHAQP27348 245 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 PTPN7P35236 360 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 ADRA1BP35368 520 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 CXCR3P49682 368 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 MAP3K10Q02779 954 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 TPGS1Q6ZTW0 290 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 CIR1Q86X95 450 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-201ENST00000321105 LGI2Q8N0V4 545 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 ARRDC4Q8NCT1 418 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 PIK3R5Q8WYR1 880 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.27□□□□□ -0.615e-7■■■■■ 39
TOP3A-201ENST00000321105 SCLYQ96I15 445 aa11.27□□□□□ -0.61
TOP3A-201ENST00000321105 SPATA13Q96N96 652 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms