RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 AIF1P55008 147 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 TSPY1Q01534 308 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 WASHC5Q12768 1159 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 MBTPS1Q14703 1052 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 PAFAH1B3Q15102 231 aaKnown RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 PRKD1Q15139 912 aaPredicted RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 FAM26DQ5JW98 314 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 MAP3K21Q5TCX8 1036 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 PM20D1Q6GTS8 502 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 SLC24A5Q71RS6 500 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 TRPM8Q7Z2W7 1104 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 SLC26A11Q86WA9 606 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 ZNF567Q8N184 647 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 PGAP3Q96FM1 320 aaPredicted RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 SERAC1Q96JX3 654 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 SUSD3Q96L08 255 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 PRDM16Q9HAZ2 1276 aa7.8□□□□□ -1.16
IFT88-201ENST00000319980 XAB2Q9HCS7 855 aaKnown RBP7.8□□□□□ -1.16
IFT88-201ENST00000319980 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 CARNS1A5YM72 827 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 TRDMT1O14717 391 aaKnown RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 UGT1A9O60656 530 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 OPHN1O60890 802 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 ZWINTO95229 277 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 PSMB4P28070 264 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 FDFT1P37268 417 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 LBX1P52954 281 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 SESN2P58004 480 aaPredicted RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 ACTN3Q08043 901 aaPredicted RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 SCAPQ12770 1279 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 SEMA3BQ13214 749 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 MTFR1Q15390 333 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 MAPRE1Q15691 268 aaKnown RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 PDZD4Q76G19 769 aaPredicted RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 TAC4Q86UU9 113 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 SPATA2LQ8IUW3 424 aaPredicted RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 NPWQ8N729 165 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 BANPQ8N9N5 519 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 CCDC63Q8NA47 563 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 LRRC8CQ8TDW0 803 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 DEPDC1BQ8WUY9 529 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 UROC1Q96N76 676 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 AGAP3Q96P47 875 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 PKMYT1Q99640 499 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 SIK2Q9H0K1 926 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 UGT1A7Q9HAW7 530 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 UGT1A10Q9HAW8 530 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 UGT1A8Q9HAW9 530 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 PNPLA8Q9NP80 782 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 SMYD2Q9NRG4 433 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 RGS18Q9NS28 235 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 ABCF3Q9NUQ8 709 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 RRN3Q9NYV6 651 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 KLHL8Q9P2G9 620 aaPredicted RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 SLC17A7Q9P2U7 560 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 PRG3Q9Y2Y8 225 aaPredicted RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 WDR27A2RRH5 827 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 TRIM49D1C9J1S8 452 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 LPXNO60711 386 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 LRIG2O94898 1065 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 FSBPO95073 299 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 OAS1P00973 400 aaKnown RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 SRGAP2BP0DMP2 458 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 PYGBP11216 843 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 HOXD10P28358 340 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 OR1G1P47890 313 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 CXCR3P49682 368 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 SLC5A3P53794 718 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 PDK4Q16654 411 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 FAM133BQ5BKY9 247 aaKnown RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 CGB2Q6NT52 195 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 SCN4BQ8IWT1 228 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 GSDMBQ8TAX9 411 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 DQX1Q8TE96 717 aaKnown RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 ALKBH8Q96BT7 664 aaKnown RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 EPAS1Q99814 870 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 ALG13Q9NP73 1137 aaKnown RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 SSU72Q9NP77 194 aaKnown RBP7.79□□□□□ -1.16
IFT88-201ENST00000319980 NUDT5Q9UKK9 219 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 PHTF1Q9UMS5 762 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 SQORQ9Y6N5 450 aa7.79□□□□□ -1.16
IFT88-201ENST00000319980 SF3B1O75533 1304 aaKnown RBP eCLIP7.78□□□□□ -1.16
IFT88-201ENST00000319980 KRT37O76014 449 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 PRKCHP24723 683 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 SCTRP47872 440 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 PGFP49763 221 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 CDK16Q00536 496 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 CBLBQ13191 982 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 OLIG2Q13516 323 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 PARP6Q2NL67 630 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 SLC39A12Q504Y0 691 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 CLLU1OSQ5K130 101 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 TTC39BQ5VTQ0 682 aaPredicted RBP7.78□□□□□ -1.16
IFT88-201ENST00000319980 FBXW10Q5XX13 1052 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 RWDD4Q6NW29 188 aaKnown RBP7.78□□□□□ -1.16
IFT88-201ENST00000319980 UNC5BQ8IZJ1 945 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 STKLD1Q8NE28 680 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 IRGQQ8WZA9 623 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 STAMBPL1Q96FJ0 436 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 STARD7Q9NQZ5 370 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms