RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 LONRF2Q1L5Z9 754 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 FAM133BQ5BKY9 247 aaKnown RBP15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 TFDP3Q5H9I0 405 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 FBXL22Q6P050 247 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 ZNF276Q8N554 614 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 TEKT4Q8WW24 435 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 IGSF8Q969P0 613 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 RBM41Q96IZ5 413 aaKnown RBP15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 CSPG4P5Q96PW8 444 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 CARD9Q9H257 536 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 LINC00597Q9H2U6 94 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 CDH7Q9ULB5 785 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 GREM1O60565 184 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 TCP1P17987 556 aaKnown RBP15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 RPS24P62847 133 aaKnown RBP15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 COL19A1Q14993 1142 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 ANKRD20A8PQ5CZ79 823 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 TANGO2Q6ICL3 276 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 C1orf228Q6PIY5 440 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 PARM1Q6UWI2 310 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 NPNTQ6UXI9 565 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 RFX8Q6ZV50 586 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 RCOR2Q8IZ40 523 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 TTC8Q8TAM2 541 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 FGF14Q92915 247 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 RPGRIP1Q96KN7 1286 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 NCAPGQ9BPX3 1015 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 MAK16Q9BXY0 300 aaKnown RBP15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 OSBPL8Q9BZF1 889 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 HEY1Q9Y5J3 304 aa15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 HELZP42694 1942 aaKnown RBP15.91■□□□□ 0.14
PDLIM5-202ENST00000318007 hCG_1818297A0A087WSY0 165 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 PDE2AO00408 941 aaPredicted RBP15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 CST8O60676 142 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 CNTN5O94779 1100 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 TACR2P21452 398 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 MTHFRP42898 656 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 ARSEP51690 589 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 SCAPQ12770 1279 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 ALFQ53S48 1182 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 GPR153Q6NV75 609 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 CREG2Q8IUH2 290 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 MAP7D3Q8IWC1 876 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 PCDH19Q8TAB3 1148 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 RSAD2Q8WXG1 361 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 ATG4AQ8WYN0 398 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 SMARCD2Q92925 531 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 PRICKLE1Q96MT3 831 aaPredicted RBP15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 HAPLN3Q96S86 360 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 EPAS1Q99814 870 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 RPP25Q9BUL9 199 aaKnown RBP15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 NDFIP2Q9NV92 336 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 NR2E1Q9Y466 385 aa15.9■□□□□ 0.14
PDLIM5-202ENST00000318007 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 F5H5T6 163 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 MLLT6P55198 1093 aaPredicted RBP15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 ZNF77Q15935 545 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 TP53INP2Q8IXH6 220 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 P2RY11Q96G91 374 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 CELF6Q96J87 481 aaKnown RBP15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 ZFP37Q9Y6Q3 630 aaPredicted RBP15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 DOCK8Q8NF50 2099 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 HEPACAM2A8MVW5 462 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 MBTPS2O43462 519 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 PAPLNO95428 1278 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 LAMP2P13473 410 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 PDK2Q15119 407 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 ADGRF1Q5T601 910 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 CELF5Q8N6W0 485 aaKnown RBP15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 MAFAQ8NHW3 353 aaPredicted RBP15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 ASIC4Q96FT7 647 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 PLA2G2FQ9BZM2 168 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 C10orf88Q9H8K7 445 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 ARHGEF4Q9NR80 690 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 GDE1Q9NZC3 331 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 MRFAP1Q9Y605 127 aa15.89■□□□□ 0.13
PDLIM5-202ENST00000318007 H3BRJ5 948 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 PECAM1P16284 738 aaPredicted RBP15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 ERCC2P18074 760 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 FCARP24071 287 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 AIF1P55008 147 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 MRPS25P82663 173 aaKnown RBP15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 TNK2Q07912 1038 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 SEMA3BQ13214 749 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 SNX1Q13596 522 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 LRRC31Q6UY01 552 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 Q6ZNB5 142 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 ZDHHC14Q8IZN3 488 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 PQLC3Q8N755 202 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 DDI1Q8WTU0 396 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 C1orf54Q8WWF1 131 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 PBKQ96KB5 322 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 RNF157Q96PX1 679 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 PRMT1Q99873 361 aaKnown RBP15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 ZNF670Q9BS34 389 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 NEU3Q9UQ49 428 aa15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 R3HDM2Q9Y2K5 976 aaKnown RBP15.88■□□□□ 0.13
PDLIM5-202ENST00000318007 PGRMC1O00264 195 aaKnown RBP15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 TUBB4AP04350 444 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms