RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 ACBD5Q5T8D3 534 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-201ENST00000315491 ZNF572Q7Z3I7 529 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-201ENST00000315491 DENND1CQ8IV53 801 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 PCDH19Q8TAB3 1148 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-201ENST00000315491 PABPC5Q96DU9 382 aaKnown RBP16.66■□□□□ 0.26
TUBB3-201ENST00000315491 SMG9Q9H0W8 520 aaKnown RBP16.66■□□□□ 0.26
TUBB3-201ENST00000315491 S1PR5Q9H228 398 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 CDH22Q9UJ99 828 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 DENND4CQ5VZ89 1909 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 MYO1CO00159 1063 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 CST8O60676 142 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 KLKB1P03952 638 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 HCAR3P49019 387 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 TFDP2Q14188 446 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 ATAT1Q5SQI0 421 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 RAP1GAP2Q684P5 730 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 CES5AQ6NT32 575 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 RFX8Q6ZV50 586 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 BBS12Q6ZW61 710 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 ZDHHC14Q8IZN3 488 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 AP1M1Q9BXS5 423 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 DCLK3Q9C098 648 aa16.66■□□□□ 0.26
TUBB3-201ENST00000315491 CTAGE15A4D2H0 777 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 LEFTY2O00292 366 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 KRIT1O00522 736 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 DAPK3O43293 454 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 LATS1O95835 1130 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 CTAGE8P0CG41 777 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 AMPD1P23109 780 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 HTR7P34969 479 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 LTBRP36941 435 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 TNNT3P45378 269 aaPredicted RBP16.65■□□□□ 0.26
TUBB3-201ENST00000315491 DYNLT1P63172 113 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 AUHQ13825 339 aaKnown RBP16.65■□□□□ 0.26
TUBB3-201ENST00000315491 DPYSQ14117 519 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 CBX2Q14781 532 aaPredicted RBP16.65■□□□□ 0.26
TUBB3-201ENST00000315491 SIX1Q15475 284 aaPredicted RBP16.65■□□□□ 0.26
TUBB3-201ENST00000315491 MANEALQ5VSG8 457 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 NADSYN1Q6IA69 706 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 POTEHQ6S545 545 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 C14orf80Q86SX3 495 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 CTAGE6Q86UF2 777 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 CHSY1Q86X52 802 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 DDX42Q86XP3 938 aaKnown RBP eCLIP16.65■□□□□ 0.26
TUBB3-201ENST00000315491 CTAGE4Q8IX94 777 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 PQLC3Q8N755 202 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 SPATA4Q8NEY3 305 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 USP13Q92995 863 aaPredicted RBP16.65■□□□□ 0.26
TUBB3-201ENST00000315491 TBC1D31Q96DN5 1066 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 ZSWIM3Q96MP5 696 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 PRMT1Q99873 361 aaKnown RBP16.65■□□□□ 0.26
TUBB3-201ENST00000315491 ARHGEF4Q9NR80 690 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 CFAP97Q9P2B7 532 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 RSPH14Q9UHP6 348 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 LSM7Q9UK45 103 aaKnown RBP16.65■□□□□ 0.26
TUBB3-201ENST00000315491 AGO1Q9UL18 857 aaKnown RBP16.65■□□□□ 0.26
TUBB3-201ENST00000315491 SH3BP1Q9Y3L3 701 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 PRRC2BQ5JSZ5 2229 aaKnown RBP16.65■□□□□ 0.26
TUBB3-201ENST00000315491 TRANK1O15050 2925 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 DOCK6Q96HP0 2047 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 CDH23Q9H251 3354 aa16.65■□□□□ 0.26
TUBB3-201ENST00000315491 GOLGA6L10A0A0M3HER8 536 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 GOLGA6L7A0A1B0GV03 622 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 E9PAM4 449 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 APOL1O14791 398 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 GREM1O60565 184 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 TACR2P21452 398 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 EPHB2P29323 1055 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 HOXC13P31276 330 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 SLC9A4Q6AI14 798 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 GPR153Q6NV75 609 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 GET4Q7L5D6 327 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-201ENST00000315491 NPAS3Q8IXF0 933 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 SH3RF2Q8TEC5 729 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 MSLNLQ96KJ4 702 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 PRDM16Q9HAZ2 1276 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 TDP1Q9NUW8 608 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 STIM2Q9P246 746 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 VANGL2Q9ULK5 521 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 NR2E1Q9Y466 385 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 ZFXP17010 805 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-201ENST00000315491 WEE1P30291 646 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 C2orf54Q08AI8 447 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 FAM133BQ5BKY9 247 aaKnown RBP16.64■□□□□ 0.25
TUBB3-201ENST00000315491 ARTNQ5T4W7 220 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 RWDD4Q6NW29 188 aaKnown RBP16.64■□□□□ 0.25
TUBB3-201ENST00000315491 LRRC31Q6UY01 552 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 Q6ZNB5 142 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 SRLQ86TD4 932 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 ZNF683Q8IZ20 524 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 TTC16Q8NEE8 873 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 ZSCAN18Q8TBC5 510 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-201ENST00000315491 MYLIPQ8WY64 445 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 RPGRIP1Q96KN7 1286 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 RIPOR3Q96MK2 946 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 DDX50Q9BQ39 737 aaKnown RBP16.64■□□□□ 0.25
TUBB3-201ENST00000315491 STOML2Q9UJZ1 356 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 NEU3Q9UQ49 428 aa16.64■□□□□ 0.25
TUBB3-201ENST00000315491 CCL26Q9Y258 94 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms