RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 C1QAP02745 245 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 STX2P32856 288 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 GPR15P49685 360 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 WDR4P57081 412 aaKnown RBP18.9■□□□□ 0.62
CCDC43-201ENST00000315286 DDR2Q16832 855 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 GKAP1Q5VSY0 366 aaPredicted RBP18.9■□□□□ 0.62
CCDC43-201ENST00000315286 FAM171A1Q5VUB5 890 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 PDCD7Q8N8D1 485 aaKnown RBP18.9■□□□□ 0.62
CCDC43-201ENST00000315286 CASP10Q92851 521 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 B3GALT6Q96L58 329 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 PGLYRP2Q96PD5 576 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 TRIM56Q9BRZ2 755 aaKnown RBP18.9■□□□□ 0.62
CCDC43-201ENST00000315286 GPR62Q9BZJ7 368 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 HCSTQ9UBK5 93 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 NUDT5Q9UKK9 219 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 ADAM28Q9UKQ2 775 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 MYO16Q9Y6X6 1858 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 SHROOM3Q8TF72 1996 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 TCP11X1B4DZS4 312 aa18.89■□□□□ 0.62
CCDC43-201ENST00000315286 CPP00450 1065 aa18.89■□□□□ 0.62
CCDC43-201ENST00000315286 NFE2Q16621 373 aaPredicted RBP18.89■□□□□ 0.62
CCDC43-201ENST00000315286 SPATS2Q86XZ4 545 aaKnown RBP18.89■□□□□ 0.62
CCDC43-201ENST00000315286 DENND1AQ8TEH3 1009 aa18.89■□□□□ 0.62
CCDC43-201ENST00000315286 SLC44A1Q8WWI5 657 aa18.89■□□□□ 0.62
CCDC43-201ENST00000315286 OSBPL2Q9H1P3 480 aa18.89■□□□□ 0.62
CCDC43-201ENST00000315286 XAB2Q9HCS7 855 aaKnown RBP18.89■□□□□ 0.62
CCDC43-201ENST00000315286 ARHGEF38Q9NXL2 777 aa18.89■□□□□ 0.62
CCDC43-201ENST00000315286 RAD54BQ9Y620 910 aa18.89■□□□□ 0.62
CCDC43-201ENST00000315286 MAD1L1Q9Y6D9 718 aa18.89■□□□□ 0.62
CCDC43-201ENST00000315286 SCN5AQ14524 2016 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 A0A1W2PQH9 124 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 KRT4P19013 534 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 PSMB4P28070 264 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 ZNF135P52742 658 aaPredicted RBP18.89■□□□□ 0.61
CCDC43-201ENST00000315286 PARP6Q2NL67 630 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 CTXN3Q4LDR2 81 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 C6orf89Q6UWU4 347 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 UNC5AQ6ZN44 842 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 PID1Q7Z2X4 250 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 CACNA2D3Q8IZS8 1091 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 DEPDC1BQ8WUY9 529 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 SEPT8Q92599 483 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 SGSM3Q96HU1 749 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 FUBP3Q96I24 572 aaKnown RBP eCLIP18.89■□□□□ 0.61
CCDC43-201ENST00000315286 EBNA1BP2Q99848 306 aaKnown RBP18.89■□□□□ 0.61
CCDC43-201ENST00000315286 SEZ6LQ9BYH1 1024 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 SIK2Q9H0K1 926 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 GGA2Q9UJY4 613 aa18.89■□□□□ 0.61
CCDC43-201ENST00000315286 PITPNM1O00562 1244 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 NCAM2O15394 837 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 MSI1O43347 362 aaKnown RBP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 TYROBPO43914 113 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 PQBP1O60828 265 aaKnown RBP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 ALDH2P05091 517 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 SRGAP2BP0DMP2 458 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 RPA3P35244 121 aaPredicted RBP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 SLC18A1P54219 525 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 SARNPP82979 210 aaKnown RBP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 CDK16Q00536 496 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 PPIDQ08752 370 aaKnown RBP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 MRPL58Q14197 206 aaKnown RBP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 MICALCLQ6ZW33 695 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 PIGWQ7Z7B1 504 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 NUP93Q8N1F7 819 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 DEFB118Q96PH6 123 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 SMOC2Q9H3U7 446 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 OSER1Q9NX31 292 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 MARCH5Q9NX47 278 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 LRFN2Q9ULH4 789 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 SMG5Q9UPR3 1016 aaKnown RBP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 CXorf49A8MYA2 514 aaPredicted RBP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 TRDMT1O14717 391 aaKnown RBP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 PTPN3P26045 913 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 SLC11A1P49279 550 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 SF3A3Q12874 501 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 IFT88Q13099 833 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 MTFR1Q15390 333 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 TTC9BQ8N6N2 239 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 ATAD1Q8NBU5 361 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 C8orf48Q96LL4 319 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 PAIP2Q9BPZ3 127 aaKnown RBP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 EIF2B3Q9NR50 452 aaKnown RBP18.88■□□□□ 0.61
CCDC43-201ENST00000315286 PCDHB5Q9Y5E4 795 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 IKBKGQ9Y6K9 419 aa18.88■□□□□ 0.61
CCDC43-201ENST00000315286 ASMTLO95671 621 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 APOEP02649 317 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 INHBAP08476 426 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 CA4P22748 312 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 PRKCHP24723 683 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 CYP2C18P33260 490 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 GALNT2Q10471 571 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 BRMS1LQ5PSV4 323 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 RWDD4Q6NW29 188 aaKnown RBP18.87■□□□□ 0.61
CCDC43-201ENST00000315286 PPM1NQ8N819 430 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 HDAC11Q96DB2 347 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 SCLYQ96I15 445 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 CABS1Q96KC9 395 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 MAGEB18Q96M61 343 aa18.87■□□□□ 0.61
CCDC43-201ENST00000315286 ELAC2Q9BQ52 826 aaKnown RBP18.87■□□□□ 0.61
CCDC43-201ENST00000315286 SMYD2Q9NRG4 433 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms