RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ECSITQ9BQ95 431 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 ABCG4Q9H172 646 aa13.82□□□□□ -0.2
RFFL-201ENST00000315249 ZNF7P17097 686 aaPredicted RBP13.81□□□□□ -0.2
RFFL-201ENST00000315249 GPR1P46091 355 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 AP2B1P63010 937 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 MAPK7Q13164 816 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 EEF1DP3Q658K8 133 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 PRUNE1Q86TP1 453 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 THUMPD3Q9BV44 507 aaKnown RBP13.81□□□□□ -0.2
RFFL-201ENST00000315249 ETNK1Q9HBU6 452 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 OR4Q2P0C623 313 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 CDC25CP30307 473 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 NR2C2P49116 596 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 PFKPQ01813 784 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 KIRREL3Q8IZU9 778 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 CFAP52Q8N1V2 620 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 HTR3CQ8WXA8 447 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 WNT8BQ93098 351 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 RPTORQ8N122 1335 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 COL1A2P08123 1366 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 PSEN1P49768 467 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 PPP3CAQ08209 521 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 ITGB3BPQ13352 177 aaPredicted RBP13.81□□□□□ -0.2
RFFL-201ENST00000315249 FAM183BPQ6ZVS7 135 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 SYTL2Q9HCH5 934 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 CRYL1Q9Y2S2 319 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 PEAK1Q9H792 1746 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 TBC1D3DA0A087WVF3 549 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 TBC1D3IA0A087WXS9 549 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 TBC1D3EA0A087X179 549 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 TBC1D3KA0A087X1G2 549 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 TBC1D3FA6NER0 549 aaPredicted RBP13.81□□□□□ -0.2
RFFL-201ENST00000315249 TBC1D3LB9A6J9 549 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 ANKRD65E5RJM6 399 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 RNF103O00237 685 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 SH3BGRLO75368 114 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 APOA4P06727 396 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 TBC1D3HP0C7X1 549 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 ZNF280AP59817 542 aaPredicted RBP13.81□□□□□ -0.2
RFFL-201ENST00000315249 FPGSQ05932 587 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 TUSC3Q13454 348 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 TBC1D3GQ6DHY5 549 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 TBC1D3CQ6IPX1 549 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 CHMP1BQ7LBR1 199 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 EFL1Q7Z2Z2 1120 aaKnown RBP13.81□□□□□ -0.2
RFFL-201ENST00000315249 PIGZQ86VD9 579 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 UNC93AQ86WB7 457 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 TBC1D3Q8IZP1 549 aaPredicted RBP13.81□□□□□ -0.2
RFFL-201ENST00000315249 CAMKK1Q8N5S9 505 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 CTNNAL1Q9UBT7 734 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 DLG5Q8TDM6 1919 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 PARNO95453 639 aaKnown RBP13.81□□□□□ -0.2
RFFL-201ENST00000315249 DNTTP04053 509 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 RARS2Q5T160 578 aaKnown RBP13.81□□□□□ -0.2
RFFL-201ENST00000315249 HORMAD1Q86X24 394 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 MTMR14Q8NCE2 650 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 GRAMD1AQ96CP6 724 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 PHF21BQ96EK2 531 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 KCNF1Q9H3M0 494 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 TUBGCP4Q9UGJ1 667 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 SALL3Q9BXA9 1300 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 CPSF4O95639 269 aaKnown RBP13.81□□□□□ -0.2
RFFL-201ENST00000315249 RPN2P04844 631 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 CYP2C18P33260 490 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 C9orf57Q5W0N0 161 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 E2F7Q96AV8 911 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 FAM111AQ96PZ2 611 aa13.81□□□□□ -0.2
RFFL-201ENST00000315249 ADRB2P07550 413 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 INPP5AQ14642 412 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 ABHD15Q6UXT9 468 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 EXOC2Q96KP1 924 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 ANKRD26Q9UPS8 1709 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 ICA1LQ8NDH6 482 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 ELOVL6Q9H5J4 265 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 USP12O75317 370 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 SEC24DO94855 1032 aaPredicted RBP13.8□□□□□ -0.2
RFFL-201ENST00000315249 EIF2S1P05198 315 aaKnown RBP13.8□□□□□ -0.2
RFFL-201ENST00000315249 PWP1Q13610 501 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 CLEC4FQ8N1N0 589 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 FBXL16Q8N461 479 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 CPA6Q8N4T0 437 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 BRI3BPQ8WY22 251 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 TBL1YQ9BQ87 522 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 ACP6Q9NPH0 428 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 TRPC4Q9UBN4 977 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 RWDD3Q9Y3V2 267 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 CICQ96RK0 1608 aaPredicted RBP13.8□□□□□ -0.2
RFFL-201ENST00000315249 GTF2BQ00403 316 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 KCNT2Q6UVM3 1135 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 NLRP14Q86W24 1093 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 NAT9Q9BTE0 207 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 FAM153AQ9UHL3 310 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.8□□□□□ -0.2
RFFL-201ENST00000315249 MGAT1P26572 445 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 SNAP47Q5SQN1 464 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 OR9Q1Q8NGQ5 310 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 KAT5Q92993 513 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 RHBGQ9H310 441 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 RGS18Q9NS28 235 aa13.8□□□□□ -0.2
RFFL-201ENST00000315249 DCDC2Q9UHG0 476 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms