RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 RPL34P49207 117 aaKnown RBP13.16□□□□□ -0.3
CKS2-201ENST00000314355 ZBTB16Q05516 673 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 DCAF6Q58WW2 860 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 PEAR1Q5VY43 1037 aaPredicted RBP13.16□□□□□ -0.3
CKS2-201ENST00000314355 OR6B2Q6IFH4 312 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.16□□□□□ -0.3
CKS2-201ENST00000314355 MSANTD4Q8NCY6 345 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 GANCQ8TET4 914 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 CYB5D2Q8WUJ1 264 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 SORCS1Q8WY21 1168 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 BTN2A3PQ96KV6 586 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 CNTNAP3BQ96NU0 1288 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 ZSWIM1Q9BR11 485 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 CNTNAP3Q9BZ76 1288 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 ZDHHC5Q9C0B5 715 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 MKRN2Q9H000 416 aaKnown RBP13.16□□□□□ -0.3
CKS2-201ENST00000314355 BTBD1Q9H0C5 482 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 SLC6A17Q9H1V8 727 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 LHX5Q9H2C1 402 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 NDST4Q9H3R1 872 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 CLSTN2Q9H4D0 955 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 FAM204AQ9H8W3 233 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 TMEM51Q9NW97 253 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 USP36Q9P275 1121 aaKnown RBP13.16□□□□□ -0.3
CKS2-201ENST00000314355 DNAJC12Q9UKB3 198 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 SCML1Q9UN30 329 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 NFE2L3Q9Y4A8 694 aa13.16□□□□□ -0.3
CKS2-201ENST00000314355 A0A1B0GTW7 788 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 GOLGA6L22H0YM25 854 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 IGLV3-27P01718 113 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 HLA-EP13747 358 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 PRKCHP24723 683 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 PON1P27169 355 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 CCR1P32246 355 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 VWA3BQ502W6 1294 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 MS4A13Q5J8X5 152 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 RABGAP1LQ5R372 815 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 DCAF12L1Q5VU92 463 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 IL27RAQ6UWB1 636 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 C11orf57Q6ZUT1 292 aaPredicted RBP13.15□□□□□ -0.3
CKS2-201ENST00000314355 SND1Q7KZF4 910 aaKnown RBP eCLIP13.15□□□□□ -0.3
CKS2-201ENST00000314355 CHSY1Q86X52 802 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 SLC41A1Q8IVJ1 513 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 LGI2Q8N0V4 545 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 ADAM32Q8TC27 787 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 TUBGCP2Q9BSJ2 902 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 PCED1AQ9H1Q7 454 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 ASNSD1Q9NWL6 643 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 PAXBP1Q9Y5B6 917 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 NUP205Q92621 2012 aa13.15□□□□□ -0.3
CKS2-201ENST00000314355 SYNJ2BP-COX16A0A087WUM0 186 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 METTL12A8MUP2 240 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 PAPSS1O43252 624 aaPredicted RBP13.14□□□□□ -0.31
CKS2-201ENST00000314355 HSF2BPO75031 334 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 LUC7L3O95232 432 aaKnown RBP13.14□□□□□ -0.31
CKS2-201ENST00000314355 SRPRAP08240 638 aaKnown RBP13.14□□□□□ -0.31
CKS2-201ENST00000314355 TACR2P21452 398 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 MAOBP27338 520 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 SLC6A4P31645 630 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 SULT2A1Q06520 285 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 ZNF252P-AS1Q0IIN9 211 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 SLC14A1Q13336 389 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 PDCLQ13371 301 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 CAMK2GQ13555 558 aaPredicted RBP13.14□□□□□ -0.31
CKS2-201ENST00000314355 SLC12A1Q13621 1099 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 RAPGEF1Q13905 1077 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 TEAD4Q15561 434 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 FAM133BQ5BKY9 247 aaKnown RBP13.14□□□□□ -0.31
CKS2-201ENST00000314355 ZC3H12AQ5D1E8 599 aaKnown RBP13.14□□□□□ -0.31
CKS2-201ENST00000314355 TTC39BQ5VTQ0 682 aaPredicted RBP13.14□□□□□ -0.31
CKS2-201ENST00000314355 SYPL2Q5VXT5 272 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 TMEM215Q68D42 235 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 ZNF776Q68DI1 518 aaPredicted RBP13.14□□□□□ -0.31
CKS2-201ENST00000314355 GJB7Q6PEY0 223 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 KIAA0907Q7Z7F0 614 aaPredicted RBP13.14□□□□□ -0.31
CKS2-201ENST00000314355 TAC4Q86UU9 113 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 ADIPOR2Q86V24 386 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 FAM124AQ86V42 546 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 CACUL1Q86Y37 369 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 ZDHHC17Q8IUH5 632 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 MINDY1Q8N5J2 469 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 TMEM35BQ8NCS4 154 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 ANKRD20A12PQ8NF67 263 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 SHC3Q92529 594 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 SNX19Q92543 992 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 SKA1Q96BD8 255 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 SLC39A13Q96H72 371 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 FCRL2Q96LA5 508 aaPredicted RBP13.14□□□□□ -0.31
CKS2-201ENST00000314355 GBP4Q96PP9 640 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 TMEM245Q9H330 911 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 CD248Q9HCU0 757 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 DDIT4Q9NX09 232 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 RRN3Q9NYV6 651 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 COX16Q9P0S2 106 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 STAP1Q9ULZ2 295 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 GON4LQ3T8J9 2241 aa13.14□□□□□ -0.31
CKS2-201ENST00000314355 TARSL2A2RTX5 802 aaKnown RBP13.13□□□□□ -0.31
CKS2-201ENST00000314355 KCNU1A8MYU2 1149 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 BCAT2O15382 392 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms